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SCN18_30_10_14_R2_B_scaffold_3470

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_3470_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..127)
DNA (126bp) protein (42aa)
SCN18_30_10_14_R2_B_scaffold_3470_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(561..821)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003148C53
SCN18_30_10_14_R2_B_scaffold_3470_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(821..1741)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D88E23
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA25859.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3470_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1843..3276)
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E44AE9
heavy metal sensor signal transduction histidine kinase
SCN18_30_10_14_R2_B_scaffold_3470_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3254..3928)
DNA (675bp) protein (225aa)
transcriptional regulator n=1 Tax=Zavarzinella formosa RepID=UPI0003176710
DNA-binding heavy metal response regulator {ECO:0000313|EMBL:EQD49672.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
two component heavy metal response transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_3470_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4061..4531
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI00036CD3B5
kinase
Kinase {ECO:0000313|EMBL:KFA89148.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
SCN18_30_10_14_R2_B_scaffold_3470_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4545..4790
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UIW6_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC47850.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SCN18_30_10_14_R2_B_scaffold_3470_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4793..5035
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GCR2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN96226.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCN18_30_10_14_R2_B_scaffold_3470_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5032..5874
DNA (843bp) protein (281aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN76791.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein id=4444349 bin=GWF2_Lentisphaerae_52_8 species=Rhodopirellula sp. SWK7 genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_3470_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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5944..7308
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F40
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30736.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3470_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7537..9012
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C41DB
hypothetical protein
UPF0061 protein Sinac_2759 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_3470_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9015..9593)
DNA (579bp) protein (193aa)
probable secreted protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4DE8
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
Displaying 12 items

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