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SCN18_30_10_14_R2_B_scaffold_5106

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_5106_1
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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49..918
DNA (870bp) protein (290aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5A0A
phosphoribosylaminoimidazole-succinocarboxamide synthase
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_30_10_14_R2_B_scaffold_5106_2
unknown

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921..1211
DNA (291bp) protein (97aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_5106_3
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1307..2719)
DNA (1413bp) protein (471aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50AF
FHA domain-containing protein
FHA domain-containing protein {ECO:0000313|EMBL:AGA29621.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_5106_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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2989..4002
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50B0
transmembrane protein EpsH
Eight transmembrane protein EpsH, putative exosortase {ECO:0000313|EMBL:AGA29601.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_5106_5
SCNpilot_P_inoc_Thiobacillus_strain2_63_34, SCNpilot_P_inoc_Thiobacillus_strain2_63_34, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3999..5207
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50B1
VanZ family protein
Tax=CG_Rhodocyc_01
SCN18_30_10_14_R2_B_scaffold_5106_6
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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5324..6247
DNA (924bp) protein (308aa)
phosphate ABC transporter permease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50B2
polysaccharide/polyol phosphate ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_5106_7
SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, SCNPILOT_CONT_1000_P_Alphaproteobacteria_64_11, Alphaproteobacteria, Proteobacteria, Bacteria

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6306..7553
DNA (1248bp) protein (416aa)
ABC transporter related protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50B3
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABJ85600.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SCN18_30_10_14_R2_B_scaffold_5106_8
Magnetococcus marinus, Magnetococcus, Magnetococcales, Alphaproteobacteria, Proteobacteria, Bacteria

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7562..8320
DNA (759bp) protein (253aa)
glycosyl transferase, group 1 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C52F7
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABK44144.1}; TaxID=156889 species="Bacteria; Proteobacteria; Alphaproteobacteria; Magnetococcales; Magnetococcaceae; Magnetococcus.;" source="Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).;"
SCN18_30_10_14_R2_B_scaffold_5106_9
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8320..9471
DNA (1152bp) protein (384aa)
Glycosyl transferase group 1 n=2 Tax=Chloroflexus RepID=A9WK60_CHLAA
Mannosyltransferase {ECO:0000313|EMBL:KJB92709.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
group 1 glycosyl transferase
SCN18_30_10_14_R2_B_scaffold_5106_10
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9471..10601
DNA (1131bp) protein (377aa)
Glycosyl transferase, group 1 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYM6_ROSS1
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABQ91729.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCN18_30_10_14_R2_B_scaffold_5106_11
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

10598..11683
DNA (1086bp) protein (362aa)
Xanthan biosynthesis glycosyltransferase GumI n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U2M0_9PROT
Xanthan biosynthesis glycosyltransferase GumI {ECO:0000313|EMBL:EMD82083.1}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_5106_12
SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, SCNpilot_BF_INOC_Dechloromonas_67_13, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11680..12639
DNA (960bp) protein (320aa)
glycosyl transferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C52FA
glycosyl transferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCN18_30_10_14_R2_B_scaffold_5106_13
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

12636..13976
DNA (1341bp) protein (447aa)
glycosyl transferase family 2 n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C52FB
glycosyl transferase family 2 protein
Tax=RBG_16_OD1_47_10_curated
SCN18_30_10_14_R2_B_scaffold_5106_14
unknown

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comp(14140..14325)
DNA (186bp) protein (62aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_5106_15
unknown

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14572..14946
DNA (375bp) protein (125aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_5106_16
unknown

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15126..15350
DNA (225bp) protein (75aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_5106_17
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15437..16495
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI00024846D4
Uncharacterized protein {ECO:0000313|EMBL:KJD36087.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_5106_18
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16492..17487
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI00024846D5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJY11613.1}; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia dolosa AU0158.;"
SCN18_30_10_14_R2_B_scaffold_5106_19
unknown

Not on your lists

17798..18241
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4531
SCN18_30_10_14_R2_B_scaffold_5106_20
unknown

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18303..18629
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4532
SCN18_30_10_14_R2_B_scaffold_5106_21
unknown

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18640..18765
DNA (126bp) protein (42aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_5106_22
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

comp(18884..19681)
DNA (798bp) protein (266aa)
2-dehydro-3-deoxyglucarate aldolase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5445
2-dehydro-3-deoxyglucarate aldolase
2-dehydro-3-deoxyglucarate aldolase {ECO:0000313|EMBL:ADG68970.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_5106_23
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19782..20642)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3DDC
Bacterial membrane flanked domain protein {ECO:0000313|EMBL:KJL19240.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Displaying 23 items

View Taxonomy