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SCN18_30_10_14_R2_B_scaffold_5617

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_5617_1
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..1235)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN68_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30270.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_5617_2
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1534..2895)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002EBE47E
Carbohydrate-selective porin OprB {ECO:0000313|EMBL:EEF57767.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
carbohydrate-selective porin OprB
SCN18_30_10_14_R2_B_scaffold_5617_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4050..4535
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D6B0EE
terminase
Uncharacterized protein {ECO:0000313|EMBL:KKN42298.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCN18_30_10_14_R2_B_scaffold_5617_4
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4532..4705
DNA (174bp) protein (58aa)
SCN18_30_10_14_R2_B_scaffold_5617_5
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4753..5565)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F9D632
Secreted protein containing DUF1559 {ECO:0000313|EMBL:EMI25272.1}; TaxID=1263868 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
SCN18_30_10_14_R2_B_scaffold_5617_6
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6011..6304
DNA (294bp) protein (98aa)
SCN18_30_10_14_R2_B_scaffold_5617_7
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7015..7650)
DNA (636bp) protein (212aa)
SCN18_30_10_14_R2_B_scaffold_5617_8
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7728..8423)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C59F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA26055.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_5617_9
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8613..8732
DNA (120bp) protein (40aa)
SCN18_30_10_14_R2_B_scaffold_5617_10
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9622..11088
DNA (1467bp) protein (489aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
integral membrane sensor signal transduction histidine kinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F34
histidine kinase,histidine kinase
SCN18_30_10_14_R2_B_scaffold_5617_11
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11073..12446
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002FECCCC
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AGA25191.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_5617_12
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12614..13324
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3AC6
SCN18_30_10_14_R2_B_scaffold_5617_13
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14387..15313
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C559B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB15014.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_5617_14
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15325..16293
DNA (969bp) protein (323aa)
hypothetical protein, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C57F0
prepilin-type N-terminal cleavage/methylation domain-containing protein
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:AGA24533.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_5617_15
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16306..17349
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5597
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28193.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 15 items

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