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SCN18_30_10_14_R2_B_scaffold_2179

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2179_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..557)
DNA (555bp) protein (185aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
1-deoxy-D-xylulose-5-phosphate synthase (Fragment) n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=G9ZYF1_9PROT
1-deoxy-D-xylulose-5-phosphate synthase
SCN18_30_10_14_R2_B_scaffold_2179_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

905..1831
DNA (927bp) protein (309aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=Acidiphilium RepID=A5FZK2_ACICJ
SCN18_30_10_14_R2_B_scaffold_2179_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1856..3013
DNA (1158bp) protein (386aa)
Molybdenum cofactor biosynthesis protein A n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPE8_GRABC
Molybdenum cofactor biosynthesis protein A
Molybdenum cofactor biosynthesis protein A {ECO:0000313|EMBL:AHJ64323.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
SCN18_30_10_14_R2_B_scaffold_2179_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3081..3818)
DNA (738bp) protein (246aa)
Transglycosylase SLT family protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BUD1_GRABC
Transglycosylase SLT family protein
Transglycosylase SLT family protein {ECO:0000313|EMBL:ABI61571.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCN18_30_10_14_R2_B_scaffold_2179_5
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3815..4483)
DNA (669bp) protein (223aa)
5'-methylthioadenosine nucleosidase (EC:3.2.2.16 3.2.2.9)
5'-methylthioadenosine nucleosidase {ECO:0000313|EMBL:ABI63305.1}; EC=3.2.2.16 {ECO:0000313|EMBL:ABI63305.1};; EC=3.2.2.9 {ECO:0000313|EMBL:ABI63305.1};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
5'-methylthioadenosine nucleosidase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BPE7_GRABC
SCN18_30_10_14_R2_B_scaffold_2179_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4494..6431)
DNA (1938bp) protein (646aa)
squalene--hopene cyclase (EC:5.4.99.17)
Squalene--hopene cyclase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQ97_GRABC
Squalene--hopene cyclase {ECO:0000313|EMBL:GAN78434.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_30_10_14_R2_B_scaffold_2179_7
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6421..7668)
DNA (1248bp) protein (416aa)
Amine oxidase n=1 Tax=Acidiphilium sp. PM RepID=F7SAU9_9PROT
Amine oxidase {ECO:0000313|EMBL:KDM67260.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
amine oxidase
SCN18_30_10_14_R2_B_scaffold_2179_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7665..8516)
DNA (852bp) protein (284aa)
Phytoene synthase (EC:2.5.1.32)
Phytoene synthase {ECO:0000313|EMBL:AHJ63868.1}; EC=2.5.1.32 {ECO:0000313|EMBL:AHJ63868.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Phytoene synthase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQM3_GRABC
SCN18_30_10_14_R2_B_scaffold_2179_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8513..9355)
DNA (843bp) protein (281aa)
farnesyl-diphosphate farnesyltransferase (EC:2.5.1.21)
Squalene/phytoene synthase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z3I4_9PROT
Squalene/phytoene synthase {ECO:0000313|EMBL:EKN01458.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
SCN18_30_10_14_R2_B_scaffold_2179_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9352..10467)
DNA (1116bp) protein (372aa)
HpnB protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQM5_GRABC
HpnB protein
HpnB protein {ECO:0000313|EMBL:ABI62877.1}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
SCN18_30_10_14_R2_B_scaffold_2179_11
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10467..11471)
DNA (1005bp) protein (335aa)
Dihydroflavonol-4-reductase {ECO:0000313|EMBL:KFL89424.1}; EC=1.1.1.219 {ECO:0000313|EMBL:KFL89424.1};; TaxID=178901 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter malorum.;"
Hopanoid-associated sugar epimerase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HGZ6_GLUDA
dfrA; dihydroflavonol-4-reductase
SCN18_30_10_14_R2_B_scaffold_2179_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11542..12516
DNA (975bp) protein (325aa)
Hypothetical membrane spanning protein n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQM7_GRABC
Uncharacterized protein {ECO:0000313|EMBL:GAN69635.1}; TaxID=1231342 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter orleanensis JCM 7639.;"
Putative membrane spanning protein
SCN18_30_10_14_R2_B_scaffold_2179_13
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12575..13594)
DNA (1020bp) protein (340aa)
NADP-dependent oxidoreductase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002FACF1D
NADP-dependent oxidoreductase {ECO:0000313|EMBL:KGM34366.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
NADP-dependent oxidoreductase
SCN18_30_10_14_R2_B_scaffold_2179_14
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

Not on your lists

comp(13727..14080)
DNA (354bp) protein (118aa)
Pathogenesis-related protein 1-like protein n=1 Tax=Volvox carteri RepID=D8THS6_VOLCA
Pathogenesis-related protein 1-like protein {ECO:0000313|EMBL:EFJ52766.1}; TaxID=3067 species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox.;" source="Volvox carteri (Green alga).;"
Displaying 14 items

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