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SCN18_30_10_14_R2_B_scaffold_724

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_724_1
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..278)
DNA (276bp) protein (92aa)
formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase {ECO:0000313|EMBL:AEB84244.1}; EC=2.8.3.16 {ECO:0000313|EMBL:AEB84244.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Formyl-CoA transferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6D5_ALIDK
SCN18_30_10_14_R2_B_scaffold_724_2
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(275..1414)
DNA (1140bp) protein (380aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AEB84245.1}; EC=1.3.8.1 {ECO:0000313|EMBL:AEB84245.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Butyryl-CoA dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6D6_ALIDK
SCN18_30_10_14_R2_B_scaffold_724_3
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1427..1888)
DNA (462bp) protein (154aa)
MaoC domain protein dehydratase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G6D7_ALIDK
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:AEB84246.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCN18_30_10_14_R2_B_scaffold_724_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2381..3586)
DNA (1206bp) protein (402aa)
Putative uncharacterized protein n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q143V2_BURXL
amidohydrolase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R2_B_scaffold_724_5
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3839..5020
DNA (1182bp) protein (394aa)
Acyl-CoA dehydrogenase-like n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120B0_POLSJ
acyl-CoA dehydrogenase-like
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCN18_30_10_14_R2_B_scaffold_724_6
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5017..5805
DNA (789bp) protein (263aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:ABE47131.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ABE47131.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Short chain enoyl-CoA hydratase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q120B1_POLSJ
SCN18_30_10_14_R2_B_scaffold_724_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5825..6697
DNA (873bp) protein (291aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Citreicella sp. 357 RepID=I1AXK5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN87801.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
short-chain dehydrogenase/reductase SDR
SCN18_30_10_14_R2_B_scaffold_724_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6813..8036
DNA (1224bp) protein (408aa)
Tat pathway signal sequence domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4F9_9PROT
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EHL98184.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
putative substrate-binding protein
SCN18_30_10_14_R2_B_scaffold_724_9
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8135..8941)
DNA (807bp) protein (269aa)
Putative dehydrogenase/reductase protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UQW9_PSEUP
putative dehydrogenase/reductase protein
Uncharacterized protein {ECO:0000313|EMBL:KKN72752.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCN18_30_10_14_R2_B_scaffold_724_10
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

Not on your lists

9245..9853
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B332A2
phosphodiesterase, MJ0936 family
Tax=RBG_16_Chloroflexi_68_14_curated
SCN18_30_10_14_R2_B_scaffold_724_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10090..11280
DNA (1191bp) protein (397aa)
formyl-CoA transferase (EC:2.8.3.16)
Formyl-CoA transferase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CUL2_PSEUX
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R2_B_scaffold_724_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11392..11850)
DNA (459bp) protein (153aa)
Uncharacterized protein, possibly involved in aromatic compounds catabolism n=1 Tax=uncultured Rhizobiales bacterium HF4000_48A13 RepID=E0XZ60_9RHIZ
thioesterase superfamily protein
Uncharacterized protein, possibly involved in aromatic compounds catabolism {ECO:0000313|EMBL:GAK46280.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
SCN18_30_10_14_R2_B_scaffold_724_13
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11905..12999)
DNA (1095bp) protein (365aa)
Alcohol dehydrogenase GroES domain protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T9M4_CAUSK
alcohol dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
SCN18_30_10_14_R2_B_scaffold_724_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13146..13739
DNA (594bp) protein (198aa)
Carboxymuconolactone decarboxylase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU36_PARL1
carboxymuconolactone decarboxylase
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ABS63419.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_30_10_14_R2_B_scaffold_724_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13736..14938
DNA (1203bp) protein (401aa)
acyl-CoA dehydrogenase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034D70A7
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
SCN18_30_10_14_R2_B_scaffold_724_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14935..15417
DNA (483bp) protein (161aa)
acyl dehydratase n=1 Tax=Cupriavidus sp. UYPR2.512 RepID=UPI00037126E8
Acyl dehydratase {ECO:0000313|EMBL:ETR76163.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
MaoC domain-containing protein dehydratase 2
SCN18_30_10_14_R2_B_scaffold_724_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15417..16589
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI000300C164
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:GAN78312.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCN18_30_10_14_R2_B_scaffold_724_18
CN-SCN_Lautropia_89x, CN-SCN_Lautropia_89x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16614..17363)
DNA (750bp) protein (250aa)
Putative alcohol dehydrogenase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P871_AROAE
alcohol dehydrogenase
Tax=RBG_16_Betaproteobacteria_66_20_curated
SCN18_30_10_14_R2_B_scaffold_724_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17391..18491)
DNA (1101bp) protein (367aa)
Alkanal monooxygenase (FMN-linked) {ECO:0000313|EMBL:ABS63393.1}; EC=1.14.14.3 {ECO:0000313|EMBL:ABS63393.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Alkanal monooxygenase (FMN-linked) n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU10_PARL1
alkanal monooxygenase
SCN18_30_10_14_R2_B_scaffold_724_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18528..19682)
DNA (1155bp) protein (385aa)
Rieske (2Fe-2S) domain protein n=2 Tax=Rhizobiales RepID=A7HU09_PARL1
Rieske (2Fe-2S) domain-containing protein
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit {ECO:0000313|EMBL:ADI19694.1}; TaxID=710781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; environmental samples.;" source="uncultured Rhizobiales bacterium HF4000_48A13.;"
SCN18_30_10_14_R2_B_scaffold_724_21
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19810..21501)
DNA (1692bp) protein (564aa)
fatty acid--CoA ligase n=1 Tax=Roseomonas sp. B5 RepID=UPI00030F7A2A
AMP-binding protein {ECO:0000313|EMBL:KGF80479.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
AMP-binding domain-containing protein
SCN18_30_10_14_R2_B_scaffold_724_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21644..23266
DNA (1623bp) protein (541aa)
AMP-dependent synthetase and ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HU02_PARL1
cyclohexanecarboxylate-CoA ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABS63385.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_30_10_14_R2_B_scaffold_724_23
SCNPILOT_EXPT_750_BF_Plasmid_57_83, SCNPILOT_EXPT_750_BF_Plasmid_57_83, SCNPILOT_EXPT_750_BF_Plasmid_57_83, SCNPILOT_EXPT_750_BF_Plasmid_57_83, SCNPILOT_EXPT_750_BF_Plasmid_57_83, Plasmid-like

Not on your lists

comp(24316..24486)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Teredinibacter turnerae RepID=UPI000362B27F
Transposase of ISCARN70, IS4 family IS4Sa group {ECO:0000313|EMBL:CBI08980.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase IS4
SCN18_30_10_14_R2_B_scaffold_724_24
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24712..25524)
DNA (813bp) protein (271aa)
Transcriptional regulator n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GR91_PUSST
Uncharacterized protein {ECO:0000313|EMBL:KJR64695.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_724_25
SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, SCNPILOT_SOLID2_TRIM150_Hydrogenophilales_64_113, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25765..26100)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000364E0CA
putative membrane protein
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
SCN18_30_10_14_R2_B_scaffold_724_26
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26238..27482
DNA (1245bp) protein (415aa)
Cytochrome P450 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13F58_RHOPS
Uncharacterized protein {ECO:0000313|EMBL:ETX02578.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
cytochrome P450
SCN18_30_10_14_R2_B_scaffold_724_27
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27588..28382
DNA (795bp) protein (265aa)
Putative short-chain dehydrogenase 3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CCD95090.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CCD95090.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
short-chain dehydrogenase 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
Putative short-chain dehydrogenase 3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SLL3_9BRAD
SCN18_30_10_14_R2_B_scaffold_724_28
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28438..29586
DNA (1149bp) protein (383aa)
Acyl-CoA dehydrogenase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TIE8_TISMK
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AFK52536.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCN18_30_10_14_R2_B_scaffold_724_29
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29647..31203
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000376F01E
AMP-dependent synthetase and ligase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
SCN18_30_10_14_R2_B_scaffold_724_30
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31283..32467
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TTN0_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig184, whole genome shotgun sequence {ECO:0000313|EMBL:KIU45459.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative nonspecific lipid-transfer protein
Displaying items 1-30 of 38 in total

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