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SCN18_30_10_14_R2_B_scaffold_1234

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1234_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..830)
DNA (828bp) protein (276aa)
Putative alpha/beta hydrolase fold n=1 Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8K3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KIE52945.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1234_2
unknown

Not on your lists

comp(899..997)
DNA (99bp) protein (33aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1234_3
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(997..2049)
DNA (1053bp) protein (351aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QDB4_RHOPT
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACF03774.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCN18_30_10_14_R2_B_scaffold_1234_4
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2247..3512)
DNA (1266bp) protein (422aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q12ZY6_RHOPS
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE41603.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCN18_30_10_14_R2_B_scaffold_1234_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3579..4496
DNA (918bp) protein (306aa)
LysR family transcriptional regulator n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MTI2_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF20632.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
LysR family transcriptional regulator
SCN18_30_10_14_R2_B_scaffold_1234_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4474..5124)
DNA (651bp) protein (217aa)
alkB; DNA-N1-methyladenine dioxygenase (EC:1.14.11.-)
DNA-N1-methyladenine dioxygenase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EFW9_BRASB
Alkylated DNA repair protein alkB {ECO:0000313|EMBL:CCD88485.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
SCN18_30_10_14_R2_B_scaffold_1234_7
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5121..5750)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NJA8_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS28554.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1234_8
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5763..6653)
DNA (891bp) protein (297aa)
EamA-like transporter family n=1 Tax=Pseudomonas sp. GM60 RepID=J3BMD4_9PSED
Uncharacterized protein {ECO:0000313|EMBL:AHE52429.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1234_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6658..7512)
DNA (855bp) protein (285aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases n=1 Tax=uncultured alpha proteobacterium HF0070_14E07 RepID=E0XS54_9PROT
N5,N10-methylenetetrahydromethanopterin reductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R2_B_scaffold_1234_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7708..9357)
DNA (1650bp) protein (550aa)
FAD dependent oxidoreductase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q139Z4_RHOPS
Cyclohexanone monooxygenase {ECO:0000313|EMBL:ETR78797.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
FAD dependent oxidoreductase
SCN18_30_10_14_R2_B_scaffold_1234_11
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9431..10465)
DNA (1035bp) protein (345aa)
Monosaccharide ABC transporter membrane protein, CUT2 family n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EK79_BRASB
ABC transporter permease {ECO:0000313|EMBL:EWY39019.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
ABC transporter permease
SCN18_30_10_14_R2_B_scaffold_1234_12
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10462..11952)
DNA (1491bp) protein (497aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368BE20
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM34602.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
putative ABC transporter ATP-binding protein
SCN18_30_10_14_R2_B_scaffold_1234_13
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12123..13145)
DNA (1023bp) protein (341aa)
Putative ABC transporter (Substrate-binding protein) ribose transport system n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0THH8_9BRAD
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJB94483.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
sugar ABC transporter substrate-binding protein
SCN18_30_10_14_R2_B_scaffold_1234_14
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13215..14243)
DNA (1029bp) protein (343aa)
Quinone oxidoreductase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N7Q5_RHOPA
NADP-dependent oxidoreductase {ECO:0000313|EMBL:KGM35027.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
quinone oxidoreductase
SCN18_30_10_14_R2_B_scaffold_1234_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14259..15167)
DNA (909bp) protein (303aa)
isomerase (EC:5.1.-.-)
phenazine antibiotic biosynthesis-like protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00035F6AD9
Phenazine biosynthesis protein PhzF {ECO:0000313|EMBL:KGM32437.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCN18_30_10_14_R2_B_scaffold_1234_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15224..15880
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. BT03 RepID=J3B5L3_9BURK
Glycine-zipper-containing OmpA-like membrane domain containing protein {ECO:0000313|EMBL:EUC15504.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_1234_17
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16435..17283)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SN61_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAP75901.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
SCN18_30_10_14_R2_B_scaffold_1234_18
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17343..17558
DNA (216bp) protein (72aa)
Taurine catabolism dioxygenase TauD/TfdA n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CWK3_VARPS
Taurine catabolism dioxygenase TauD/TfdA
Taurine catabolism dioxygenase TauD/TfdA {ECO:0000313|EMBL:ACS18758.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCN18_30_10_14_R2_B_scaffold_1234_19
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17560..18021)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003014856
GCN5-related N-acetyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R2_B_scaffold_1234_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18133..19233)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZKT1_GLUDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI50041.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
SCN18_30_10_14_R2_B_scaffold_1234_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19846..20988)
DNA (1143bp) protein (381aa)
Rod shape-determining protein RodA n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A147_9PROT
Rod shape-determining protein RodA {ECO:0000313|EMBL:GAN77184.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
rod shape-determining protein RodA
SCN18_30_10_14_R2_B_scaffold_1234_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20990..22855)
DNA (1866bp) protein (622aa)
Cell elongation specific D,D-transpeptidase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BS37_GRABC
Cell division/elongation transpeptidase FtsI/penicillin-binding protein {ECO:0000313|EMBL:GAN77183.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
cell elongation specific D,D-transpeptidase
SCN18_30_10_14_R2_B_scaffold_1234_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22857..23411)
DNA (555bp) protein (185aa)
Putative rod shape-determining protein MreD n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIW5_9PROT
Rod shape-determining protein MreD {ECO:0000313|EMBL:GAN77182.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
rod shape-determining protein mreD
SCN18_30_10_14_R2_B_scaffold_1234_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23432..24376)
DNA (945bp) protein (315aa)
Cell shape-determining protein MreC n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RIW4_9PROT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Rod shape-determining protein mreC
Displaying 24 items

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