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SCN18_26_2_15_R2_B_scaffold_905

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_905_1
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(93..884)
DNA (792bp) protein (264aa)
enoyl-ACP reductase (EC:1.3.1.9)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q7D5_ACIAP
SCN18_26_2_15_R2_B_scaffold_905_2
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1024..2751
DNA (1728bp) protein (576aa)
Amidohydrolase 3 n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWK5_PARL1
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ABS64288.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCN18_26_2_15_R2_B_scaffold_905_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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2748..3701
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037ADA17
Alcohol dehydrogenase {ECO:0000313|EMBL:KFG68565.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
NADP-dependent oxidoreductase domain-containing protein
SCN18_26_2_15_R2_B_scaffold_905_4
SCNPILOT_SOLID2_TRIM150_Afipia_61_20, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3794..4612)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HLJ4_9RHIZ
Oxidoreductase {ECO:0000313|EMBL:EWY41183.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
short-chain dehydrogenase/reductase SDR
SCN18_26_2_15_R2_B_scaffold_905_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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5044..5523
DNA (480bp) protein (160aa)
bacterioferritin n=1 Tax=Methylocystis parvus RepID=UPI0002E7B0B5
Bacterioferritin {ECO:0000256|RuleBase:RU000623}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Bacterioferritin
SCN18_26_2_15_R2_B_scaffold_905_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5617..6657
DNA (1041bp) protein (347aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EFH13666.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EFH13666.1};; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Methionine synthase, vitamin-B12 independent n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RG96_9PROT
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_905_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6654..8168)
DNA (1515bp) protein (505aa)
Putative transporter n=1 Tax=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) RepID=B2VEU5_ERWT9
transporter
Putative transporter {ECO:0000313|EMBL:CAO96800.1}; TaxID=338565 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia tasmaniensis (strain DSM 17950 / Et1/99).;"
SCN18_26_2_15_R2_B_scaffold_905_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8233..9738)
DNA (1506bp) protein (502aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Brenneria sp. EniD312 RepID=G7LK83_9ENTR
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EHD21469.1}; TaxID=598467 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Brenneria.;" source="Brenneria sp. EniD312.;"
arabinose efflux permease family protein
SCN18_26_2_15_R2_B_scaffold_905_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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9943..10992
DNA (1050bp) protein (350aa)
5,10-methylenetetrahydromethanopterin reductase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RH06_PHEZH
5,10-methylenetetrahydromethanopterin reductase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R2_B_scaffold_905_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10989..11456
DNA (468bp) protein (156aa)
GNAT family acetyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B37B9B
acetyltransferase domain protein
Acetyltransferase domain protein {ECO:0000313|EMBL:AJZ61100.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
SCN18_26_2_15_R2_B_scaffold_905_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11453..12391
DNA (939bp) protein (313aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:KCV60277.1}; EC=3.4.-.- {ECO:0000313|EMBL:KCV60277.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
Putative lipase n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MDL7_BORBM
lipase
SCN18_26_2_15_R2_B_scaffold_905_12
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12617..13651
DNA (1035bp) protein (345aa)
Luciferase-like monooxygenase n=1 Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8H6G9_ARTCA
Uncharacterized protein {ECO:0000313|EMBL:ETR79119.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
luciferase-like monooxygenase
SCN18_26_2_15_R2_B_scaffold_905_13
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13723..15129)
DNA (1407bp) protein (469aa)
Oxidoreductase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SQ11_9BRAD
Oxidoreductase {ECO:0000313|EMBL:CCD96288.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
oxidoreductase
SCN18_26_2_15_R2_B_scaffold_905_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15126..16784)
DNA (1659bp) protein (553aa)
Putative oligopeptide transport protein (ABC superfamily, atp_bind) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T428_9BRAD
Putative oligopeptide transport protein (ABC superfamily, atp_bind) {ECO:0000313|EMBL:CCE01205.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
putative oligopeptide transport protein, ABC superfamily
SCN18_26_2_15_R2_B_scaffold_905_15
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16781..17647)
DNA (867bp) protein (289aa)
Dipeptide transport protein (ABC superfamily, permease component) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SQ08_9BRAD
putative dipeptide transport protein, ABC superfamily
Dipeptide transport protein (ABC superfamily, permease component) {ECO:0000313|EMBL:CCD96285.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
SCN18_26_2_15_R2_B_scaffold_905_16
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17769..18800)
DNA (1032bp) protein (344aa)
ABC transporter permease protein 2 n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I2Z1_AZOC5
DppB protein {ECO:0000313|EMBL:BAQ44573.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
ABC transporter permease
SCN18_26_2_15_R2_B_scaffold_905_17
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18945..20558)
DNA (1614bp) protein (538aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SQ10_9BRAD
Putative D,D-dipeptide-binding periplasmic protein DdpA {ECO:0000313|EMBL:CEJ15317.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
ABC transporter substrate-binding protein
SCN18_26_2_15_R2_B_scaffold_905_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20723..22906)
DNA (2184bp) protein (728aa)
Histidine kinase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8ITY0_METNO
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACL60838.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCN18_26_2_15_R2_B_scaffold_905_19
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23115..24446
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E6739F
D-amino acid oxidase {ECO:0000313|EMBL:KJB95670.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG Glucose-inhibited division protein A
SCN18_26_2_15_R2_B_scaffold_905_20
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24556..25530
DNA (975bp) protein (325aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=911239 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF149.;"
hemB1; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Pseudomonas sp. CF149 RepID=S6I3Z3_9PSED
SCN18_26_2_15_R2_B_scaffold_905_21
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25546..26031
DNA (486bp) protein (162aa)
Acyl dehydratase n=1 Tax=Streptomyces sp. AA4 RepID=D9UW95_9ACTO
Acyl dehydratase {ECO:0000313|EMBL:EFL10629.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
MaoC domain-containing protein dehydratase
SCN18_26_2_15_R2_B_scaffold_905_22
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26045..26413
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A2Z1_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAN75938.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
SCN18_26_2_15_R2_B_scaffold_905_23
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26818..27486)
DNA (669bp) protein (223aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QAL0_ACIAP
ThiJ/PfpI domain-containing protein
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:ADX46051.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCN18_26_2_15_R2_B_scaffold_905_24
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27576..29006
DNA (1431bp) protein (477aa)
Oxidoreductase, GMC family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMA1_9PROT
Oxidoreductase, GMC family protein {ECO:0000313|EMBL:EDP65705.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
GMC family oxidoreductase
Displaying 24 items

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