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SCN18_26_2_15_R2_B_scaffold_15

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Displaying items 1-30 of 461 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_15_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(150..1289)
DNA (1140bp) protein (380aa)
UPI0003CEAD64 related cluster n=2 Tax=unknown RepID=UPI0003CEAD64
Uncharacterized protein {ECO:0000313|EMBL:EJK87332.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_15_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1621..2994
DNA (1374bp) protein (458aa)
alpha-glucoside ABC transporter substrate-binding protein n=1 Tax=Rhizobium giardinii RepID=UPI00036D5B96
Alpha-glucosides-binding periplasmic protein AglE {ECO:0000313|EMBL:CDP52764.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
aglE; Alpha-glucosides-binding periplasmic protein AglE
SCN18_26_2_15_R2_B_scaffold_15_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3104..4117
DNA (1014bp) protein (338aa)
ABC alpha-glucoside transporter, inner membrane subunit AglF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB9_PELHB
Alpha-glucoside ABC transporter permease {ECO:0000313|EMBL:KFL27717.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
alpha-glucoside ABC transporter inner membrane protein AglF
SCN18_26_2_15_R2_B_scaffold_15_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4117..5325
DNA (1209bp) protein (403aa)
Alpha-glucoside transport system permease protein AglG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAC0_PELHB
Alpha-glucoside transport system permease protein AglG {ECO:0000313|EMBL:CDP52766.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
alpha-glucoside transport system permease protein AglG
SCN18_26_2_15_R2_B_scaffold_15_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5286..5528)
DNA (243bp) protein (81aa)
SCN18_26_2_15_R2_B_scaffold_15_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5530..6219)
DNA (690bp) protein (230aa)
UPI0003D03F51 related cluster n=1 Tax=unknown RepID=UPI0003D03F51
Uncharacterized protein {ECO:0000313|EMBL:KEO88703.1}; TaxID=1044 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter longus.;"
SCN18_26_2_15_R2_B_scaffold_15_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6442..7548)
DNA (1107bp) protein (369aa)
Transcriptional regulator RafR, putative n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAC1_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL27715.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
transcriptional regulator RafR
SCN18_26_2_15_R2_B_scaffold_15_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7683..9374
DNA (1692bp) protein (564aa)
Alpha-glucosidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAC2_PELHB
Alpha-glucosidase {ECO:0000313|EMBL:KFL27714.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
alpha-glucosidase
SCN18_26_2_15_R2_B_scaffold_15_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9405..10412
DNA (1008bp) protein (336aa)
Alpha-glucoside transport ATP-binding protein AglK n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAC3_PELHB
Glycerol-3-phosphate ABC transporter ATPase {ECO:0000313|EMBL:KFL27713.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
alpha-glucoside transport ATP-binding protein AglK
SCN18_26_2_15_R2_B_scaffold_15_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10514..12088)
DNA (1575bp) protein (525aa)
Glutathione import ATP-binding protein GsiA n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CTF1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKC33214.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
peptide/opine/nickel uptake family ABC transporter, ATP-binding protein
SCN18_26_2_15_R2_B_scaffold_15_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12075..12911)
DNA (837bp) protein (279aa)
peptide ABC transporter permease n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B74953
Peptide/opine/nickel uptake family ABC transporter, permease protein {ECO:0000313|EMBL:KFC68393.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
binding-protein-dependent transport systems inner membrane component
SCN18_26_2_15_R2_B_scaffold_15_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12908..13780)
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00035D3F11
Peptide ABC transporter {ECO:0000313|EMBL:KFL30735.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
binding-protein-dependent transport system inner membrane protein
SCN18_26_2_15_R2_B_scaffold_15_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13912..16695)
DNA (2784bp) protein (928aa)
Two-component hybrid sensor and regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAC7_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL27707.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
two-component hybrid sensor and regulator
SCN18_26_2_15_R2_B_scaffold_15_trna_1
unknown

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16935..17008
DNA (74bp)
transferRNA His
SCN18_26_2_15_R2_B_scaffold_15_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17082..17567)
DNA (486bp) protein (162aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Bacterioferritin n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A2D7_RHIFH
bfr; Bacterioferritin
SCN18_26_2_15_R2_B_scaffold_15_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17948..18220)
DNA (273bp) protein (91aa)
SCN18_26_2_15_R2_B_scaffold_15_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18290..20233)
DNA (1944bp) protein (648aa)
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8GY69_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:KKB13800.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_15_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20285..20896)
DNA (612bp) protein (204aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:CDP52777.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ErfK/YbiS/YcfS/YnhG protein
SCN18_26_2_15_R2_B_scaffold_15_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21016..21603
DNA (588bp) protein (196aa)
guaA1; GMP synthase (EC:6.3.5.2)
3-methyladenine-DNA glycosylase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NV02_9RHOB
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:KKB86022.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
SCN18_26_2_15_R2_B_scaffold_15_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21674..21880)
DNA (207bp) protein (69aa)
SCN18_26_2_15_R2_B_scaffold_15_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22490..23929
DNA (1440bp) protein (480aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQZ1_9RHIZ
SCN18_26_2_15_R2_B_scaffold_15_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23929..25029
DNA (1101bp) protein (367aa)
Putative ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD6_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB11448.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative ATP phosphoribosyltransferase regulatory subunit
SCN18_26_2_15_R2_B_scaffold_15_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25022..25750
DNA (729bp) protein (243aa)
ATP phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00046302}; EC=2.4.2.17 {ECO:0000256|SAAS:SAAS00046302};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ATP phosphoribosyltransferase catalytic subunit n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD7_PELHB
ATP phosphoribosyltransferase
SCN18_26_2_15_R2_B_scaffold_15_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25887..26321)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00037FCBA5
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:AFK61429.1}; TaxID=1036672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001); (Tetrathiobacter kashmirensis).;"
SCN18_26_2_15_R2_B_scaffold_15_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26489..27238
DNA (750bp) protein (250aa)
Putative membrane protein YfcA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAD9_PELHB
Membrane protein {ECO:0000313|EMBL:KKB81416.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
putative membrane protein YfcA
SCN18_26_2_15_R2_B_scaffold_15_25
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27473..27949)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003788F28
Uncharacterized protein {ECO:0000313|EMBL:CDP52787.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_15_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28015..28311)
DNA (297bp) protein (99aa)
UPI0003CEAD9B related cluster n=1 Tax=unknown RepID=UPI0003CEAD9B
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDH45408.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
helix-turn-helix domain-containing protein
SCN18_26_2_15_R2_B_scaffold_15_27
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28308..28628)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B763DD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
SCN18_26_2_15_R2_B_scaffold_15_28
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28727..30367)
DNA (1641bp) protein (547aa)
60 kDa chaperonin n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAE1_PELHB
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
heat shock protein 60 family chaperone GroEL
SCN18_26_2_15_R2_B_scaffold_15_29
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30415..30702)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11LG3_MESSB
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
groES-3; chaperonin GroES 3
Displaying items 1-30 of 461 in total

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