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SCN18_26_2_15_R2_B_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 385 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R2_B_scaffold_26_1
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..602
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A7A5_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE96135.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCN18_26_2_15_R2_B_scaffold_26_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

901..1287
DNA (387bp) protein (129aa)
SCN18_26_2_15_R2_B_scaffold_26_3
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1449..2054
DNA (606bp) protein (202aa)
Bll7632 putative L-2-Amino-thiazoline-4-carboxyl ic acid hydrolase {ECO:0000313|EMBL:CDP51427.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
SCN18_26_2_15_R2_B_scaffold_26_4
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2429..3646
DNA (1218bp) protein (406aa)
Oxalate/formate antiporter n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGC2_PELHB
Oxalate/formate antiporter {ECO:0000313|EMBL:KFC71776.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
Oxalate/formate antiporter
SCN18_26_2_15_R2_B_scaffold_26_5
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3712..4125
DNA (414bp) protein (138aa)
PhnB protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI0003828742
Contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ10920.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.;"
3-demethylubiquinone-9 3-methyltransferase
SCN18_26_2_15_R2_B_scaffold_26_6
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4140..4607
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI000360A7CA
NUDIX hydrolase {ECO:0000313|EMBL:KFL28642.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
NUDIX hydrolase
SCN18_26_2_15_R2_B_scaffold_26_7
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4665..5138
DNA (474bp) protein (158aa)
SCN18_26_2_15_R2_B_scaffold_26_8
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5139..5471)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3G8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EWY42197.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_26_9
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5559..6029
DNA (471bp) protein (157aa)
SCN18_26_2_15_R2_B_scaffold_26_10
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6093..6539
DNA (447bp) protein (149aa)
Spore-cortex-lytic enzyme prepeptide n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RDH8_PELHB
Spore-cortex-lytic enzyme prepeptide {ECO:0000313|EMBL:CDP52972.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
spore-cortex-lytic enzyme prepeptide
SCN18_26_2_15_R2_B_scaffold_26_11
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6567..7217
DNA (651bp) protein (217aa)
Oxidoreductase molybdopterin binding protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A925_STAND
Sulfite oxidase and related enzymes {ECO:0000313|EMBL:CDP52615.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
oxidoreductase molybdopterin binding protein
SCN18_26_2_15_R2_B_scaffold_26_12
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7241..7741)
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XVD3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KFE70567.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_26_13
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7933..8337
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000366D1BA
SCN18_26_2_15_R2_B_scaffold_26_14
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8678..10153
DNA (1476bp) protein (492aa)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
AMP nucleosidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB97_PELHB
AMP nucleosidase
SCN18_26_2_15_R2_B_scaffold_26_15
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10210..10500
DNA (291bp) protein (97aa)
Nucleotidyltransferase domain protein n=1 Tax=Rothia dentocariosa (strain ATCC 17931 / CDC X599 / XDIA) RepID=E3H508_ROTDC
DNA polymerase
DNA polymerase {ECO:0000313|EMBL:KJX28579.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
SCN18_26_2_15_R2_B_scaffold_26_16
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10497..10868
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTQ0_PSEUP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER56153.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCN18_26_2_15_R2_B_scaffold_26_17
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10853..11146)
DNA (294bp) protein (98aa)
UPI0003CE5B25 related cluster n=1 Tax=unknown RepID=UPI0003CE5B25
Stress responsive A/B Barrel Domain protein {ECO:0000313|EMBL:KFC72416.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
hypothetical protein
SCN18_26_2_15_R2_B_scaffold_26_18
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11148..13436)
DNA (2289bp) protein (763aa)
NADP-dependent malic enzyme {ECO:0000313|EMBL:CDP52612.1}; EC=1.1.1.40 {ECO:0000313|EMBL:CDP52612.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
NADP-dependent malic enzyme n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB98_PELHB
NADP-dependent malic enzyme
SCN18_26_2_15_R2_B_scaffold_26_19
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13512..15110)
DNA (1599bp) protein (533aa)
EAL domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RB99_PELHB
EAL domain protein {ECO:0000313|EMBL:KFC72418.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
diguanylate phosphodiesterase
SCN18_26_2_15_R2_B_scaffold_26_20
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15202..16986)
DNA (1785bp) protein (595aa)
Aspartyl-tRNA(Asn) synthetase {ECO:0000313|EMBL:CDP52610.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CDP52610.1};; EC=6.1.1.23 {ECO:0000313|EMBL:CDP52610.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
aspartyl-tRNA synthetase n=1 Tax=Aureimonas ureilytica RepID=UPI00037BEAC6
aspS; aspartyl-tRNA synthetase
SCN18_26_2_15_R2_B_scaffold_26_21
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17177..18346
DNA (1170bp) protein (390aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
Ribonuclease D n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA1_PELHB
ribonuclease D
SCN18_26_2_15_R2_B_scaffold_26_22
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18439..19428
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HLK3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJC59174.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
AraC family transcriptional regulator
SCN18_26_2_15_R2_B_scaffold_26_23
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19555..20094
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E20EF
Uncharacterized protein {ECO:0000313|EMBL:CDX62132.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
porin
SCN18_26_2_15_R2_B_scaffold_26_24
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20108..21649)
DNA (1542bp) protein (514aa)
Exopolyphosphatase {ECO:0000313|EMBL:CDP52608.1}; EC=3.6.1.11 {ECO:0000313|EMBL:CDP52608.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Exopolyphosphatase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA2_PELHB
exopolyphosphatase
SCN18_26_2_15_R2_B_scaffold_26_25
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21646..23826)
DNA (2181bp) protein (727aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Polyphosphate kinase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA3_PELHB
polyphosphate kinase
SCN18_26_2_15_R2_B_scaffold_26_26
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23819..24535)
DNA (717bp) protein (239aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA4_PELHB
DnaA regulatory inactivator Hda {ECO:0000313|EMBL:CDP52606.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
chromosome replication initiator DnaA
SCN18_26_2_15_R2_B_scaffold_26_27
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24532..25695)
DNA (1164bp) protein (388aa)
Putative permease often clustered with de novo purine synthesis n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA5_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KKB12795.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
putative permease often clustered with de novo purine synthesis
SCN18_26_2_15_R2_B_scaffold_26_28
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25782..26858
DNA (1077bp) protein (359aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA6_PELHB
phosphoribosylformylglycinamidine cyclo-ligase
SCN18_26_2_15_R2_B_scaffold_26_29
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26855..27442
DNA (588bp) protein (196aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
Phosphoribosylglycinamide formyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBA7_PELHB
phosphoribosylglycinamide formyltransferase
SCN18_26_2_15_R2_B_scaffold_26_30
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27500..28306
DNA (807bp) protein (269aa)
Alpha/beta hydrolase fold protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QTY7_METTR
hydrolase family protein
Hydrolase family protein {ECO:0000313|EMBL:AHK45339.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
Displaying items 1-30 of 385 in total

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