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SCN18_25_8_15_R2_B_scaffold_322

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Displaying items 1-30 of 155 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_322_1
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1278
DNA (1278bp) protein (426aa)
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L6A7_FRAAD
acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase
Acetylornithine deacetylase/succinyldiaminopimelate desuccinylase-like deacylase {ECO:0000313|EMBL:AFC86784.1}; Flags: Precursor;; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
SCN18_25_8_15_R2_B_scaffold_322_2
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1351..4482
DNA (3132bp) protein (1044aa)
Glycosyl hydrolase, BNR repeat-containing protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B506_9ZZZZ
Glycosyl hydrolase, BNR repeat-containing protein {ECO:0000313|EMBL:EQD49310.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
BNR repeat-containing glycosyl hydrolase
SCN18_25_8_15_R2_B_scaffold_322_3
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4574..5377
DNA (804bp) protein (268aa)
Putative uncharacterized protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UVF1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGN31444.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_322_4
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5518..8151
DNA (2634bp) protein (878aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G626_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99160.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_322_5
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8214..8828)
DNA (615bp) protein (205aa)
GntR family transcriptional regulator n=1 Tax=Xanthomonas sp. SHU199 RepID=UPI00035DFFCE
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AJC47471.1}; TaxID=56458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
SCN18_25_8_15_R2_B_scaffold_322_6
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9216..11120
DNA (1905bp) protein (635aa)
Histidine ammonia-lyase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKJ1_9GAMM
Histidine ammonia-lyase {ECO:0000313|EMBL:EIL99982.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
histidine ammonia-lyase
SCN18_25_8_15_R2_B_scaffold_322_7
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11286..12959
DNA (1674bp) protein (558aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W010_9GAMM
SCN18_25_8_15_R2_B_scaffold_322_8
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13043..13624)
DNA (582bp) protein (194aa)
SCN18_25_8_15_R2_B_scaffold_322_9
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13754..15709)
DNA (1956bp) protein (652aa)
Glycyl aminopeptidase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFI4_9GAMM
glycyl aminopeptidase
Glycyl aminopeptidase {ECO:0000313|EMBL:AGG89604.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCN18_25_8_15_R2_B_scaffold_322_10
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16409..20977
DNA (4569bp) protein (1523aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ62_THIDA
Uncharacterized protein {ECO:0000313|EMBL:AAZ97308.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_322_11
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21019..23334)
DNA (2316bp) protein (772aa)
phospholipase C (EC:3.1.4.3)
Phospholipase C n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RZL6_9BURK
Phospholipase C {ECO:0000313|EMBL:EHP44358.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
SCN18_25_8_15_R2_B_scaffold_322_12
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23331..23540)
DNA (210bp) protein (70aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCN18_25_8_15_R2_B_scaffold_322_13
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_12, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23606..25117)
DNA (1512bp) protein (504aa)
Ferredoxin-dependent glutamate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WU83_9GAMM
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:EIM03025.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
glutamate synthase family protein
SCN18_25_8_15_R2_B_scaffold_322_14
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25449..26381
DNA (933bp) protein (311aa)
Acetoin reductase n=1 Tax=Thauera sp. 63 RepID=N6YA45_9RHOO
Acetoin reductase {ECO:0000313|EMBL:ENO76849.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
acetoin reductase
SCN18_25_8_15_R2_B_scaffold_322_15
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26594..28774)
DNA (2181bp) protein (727aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021N3_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCN18_25_8_15_R2_B_scaffold_322_16
Rhodanobacter spathiphylli_SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_67_34, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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29202..29759
DNA (558bp) protein (186aa)
LemA family protein n=1 Tax=Thiocapsa marina 5811 RepID=F9U802_9GAMM
LemA family protein {ECO:0000313|EMBL:EGV19782.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
lema family protein
SCN18_25_8_15_R2_B_scaffold_322_17
SCNpilot_P_inoc_Xanthomonadales_63_13, SCNpilot_P_inoc_Xanthomonadales_63_13, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29756..31657
DNA (1902bp) protein (634aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH22379.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
Putative transmembrane signal peptide protein id=4909413 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative transmembrane signal peptide protein
SCN18_25_8_15_R2_B_scaffold_322_18
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31758..32183
DNA (426bp) protein (142aa)
DoxX family protein id=4586536 bin=GWC2_Pelobacter_58_13 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
DoxX family protein
Tax=GWC2_Pelobacteraceae_58_13_curated
SCN18_25_8_15_R2_B_scaffold_322_19
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32297..33154
DNA (858bp) protein (286aa)
Serine/threonine protein kinase involved in cell cycle control n=1 Tax=Rhodanobacter sp. 115 RepID=I4WH10_9GAMM
Serine/threonine protein kinase involved in cell cycle control {ECO:0000313|EMBL:EIL98751.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
serine/threonine protein kinase involved in cell cycle control
SCN18_25_8_15_R2_B_scaffold_322_20
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33237..35264)
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYJ7_9GAMM
Peptidase M1 {ECO:0000313|EMBL:KGI77649.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
aminopeptidase N
SCN18_25_8_15_R2_B_scaffold_322_21
SCNPILOT_CONT_500_P_Xanthomonadales_66_42, SCNPILOT_CONT_500_P_Xanthomonadales_66_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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35537..36832
DNA (1296bp) protein (432aa)
Putative mechanosensitive ion channel n=1 Tax=Rhodanobacter sp. 115 RepID=I4WA53_9GAMM
Putative mechanosensitive ion channel {ECO:0000313|EMBL:EIL96344.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
mechanosensitive ion channel protein MscS
SCN18_25_8_15_R2_B_scaffold_322_22
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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37147..37572
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V6_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:KGI78414.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_322_23
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37579..39147)
DNA (1569bp) protein (523aa)
Peptidase dimerization domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ER18_EMTOG
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AHG89293.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCN18_25_8_15_R2_B_scaffold_322_24
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39382..40137
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTU0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90631.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_322_25
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40567..41361
DNA (795bp) protein (265aa)
SCN18_25_8_15_R2_B_scaffold_322_26
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41710..42396)
DNA (687bp) protein (229aa)
SCN18_25_8_15_R2_B_scaffold_322_27
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42731..44611)
DNA (1881bp) protein (627aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000361DEC7
Uncharacterized protein {ECO:0000313|EMBL:EIL92446.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_322_28
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45135..45911
DNA (777bp) protein (259aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Acidiphilium sp. PM RepID=F7S6L2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGO95219.1}; Flags: Fragment;; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_322_29
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46063..48909)
DNA (2847bp) protein (949aa)
Peptidase M14, carboxypeptidase A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NP4_SOLUE
Peptidase M14, carboxypeptidase A {ECO:0000313|EMBL:ABJ88726.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
peptidase M14, carboxypeptidase A
SCN18_25_8_15_R2_B_scaffold_322_30
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49319..50701
DNA (1383bp) protein (461aa)
Helix-turn-helix, Fis-type id=3598858 bin=GWC2_Nitrospirae-rel_56_14 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Fis family two component sigma-54 specific transcriptional regulator
Tax=GWC2_Nitrospirae_56_14_curated
Displaying items 1-30 of 155 in total

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