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SCN18_25_8_15_R2_B_scaffold_4106

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_4106_1
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(175..885)
DNA (711bp) protein (237aa)
Glucose sorbosone dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTG7_9GAMM
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:EIL90508.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glucose sorbosone dehydrogenase
SCN18_25_8_15_R2_B_scaffold_4106_2
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(901..1446)
DNA (546bp) protein (182aa)
Glucose sorbosone dehydrogenase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTG7_9GAMM
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:EIL90508.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glucose sorbosone dehydrogenase
SCN18_25_8_15_R2_B_scaffold_4106_3
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1533..2684)
DNA (1152bp) protein (384aa)
Amidohydrolase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZSX6_RHILW
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHK46099.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCN18_25_8_15_R2_B_scaffold_4106_4
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2677..3882)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002DD99D8
putative diaminopropionate ammonia-lyase
Putative diaminopropionate ammonia-lyase {ECO:0000313|EMBL:AHG65211.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
SCN18_25_8_15_R2_B_scaffold_4106_5
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3938..5191)
DNA (1254bp) protein (418aa)
allantoate amidohydrolase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00035C51DE
Allantoate amidohydrolase {ECO:0000313|EMBL:KJA11820.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
amidase, hydantoinase/carbamoylase family protein
SCN18_25_8_15_R2_B_scaffold_4106_6
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5310..5783
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002F82558
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AHG65212.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
SCN18_25_8_15_R2_B_scaffold_4106_7
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5941..6426
DNA (486bp) protein (162aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Cytosine/adenosine deaminase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTC3_9GAMM
cytosine/adenosine deaminase
SCN18_25_8_15_R2_B_scaffold_4106_8
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6542..7741
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287D77C
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AHG92473.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCN18_25_8_15_R2_B_scaffold_4106_9
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7881..8492)
DNA (612bp) protein (204aa)
Putative divalent heavy-metal cations transporter n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L0L1_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:KGI79023.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative divalent heavy-metal cations transporter
SCN18_25_8_15_R2_B_scaffold_4106_10
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8733..10745)
DNA (2013bp) protein (671aa)
Outer membrane hemin receptor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCR1_9GAMM
Outer membrane hemin receptor {ECO:0000313|EMBL:EIL97252.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative TonB-dependent transporter
SCN18_25_8_15_R2_B_scaffold_4106_11
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11009..11518
DNA (510bp) protein (170aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW58_9GAMM
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
SCN18_25_8_15_R2_B_scaffold_4106_12
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11609..12808
DNA (1200bp) protein (400aa)
Aspartate aminotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW2_9GAMM
Aspartate aminotransferase {ECO:0000313|EMBL:EIL99403.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aspartate/tyrosine/aromatic aminotransferase
SCN18_25_8_15_R2_B_scaffold_4106_13
SCNPILOT_SOLID_1_TRIM150_Rhodanobacter_66_29, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12932..13918
DNA (987bp) protein (329aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Malate dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW1_9GAMM
malate dehydrogenase
Displaying 13 items

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