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SCN18_30_10_14_R5_P_scaffold_158

Search features with annotation key words

Displaying items 1-30 of 235 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R5_P_scaffold_158_1
SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, SCNPILOT_CONT_750_BF_Sphingobacteriales_50_21, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..852
DNA (852bp) protein (284aa)
amidotransferase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00035D0BC3
amidotransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

849..1121
DNA (273bp) protein (91aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1178..2248
DNA (1071bp) protein (357aa)
Tax=RBG_13_OP3X_46_9_curated
SCN18_30_10_14_R5_P_scaffold_158_4
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2345..3559
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7D6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE78724.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_158_5
SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, SCNPILOT_SOLID2_TRIM150_Rhizobiales_67_9, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3671..5518
DNA (1848bp) protein (616aa)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:AKH21488.1}; EC=4.2.1.9 {ECO:0000313|EMBL:AKH21488.1};; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=ILVD_METFK
SCN18_30_10_14_R5_P_scaffold_158_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5520..6647
DNA (1128bp) protein (376aa)
Dihydroorotase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H7Z2_9BRAD
Dihydroorotase {ECO:0000313|EMBL:ERF85962.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
dihydroorotase
SCN18_30_10_14_R5_P_scaffold_158_7
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6871..7839)
DNA (969bp) protein (323aa)
Methyltransferase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CU63_VARPS
methyltransferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_8
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7836..9032)
DNA (1197bp) protein (399aa)
Putative methyltransferase n=1 Tax=Caulobacter sp. AP07 RepID=J2P630_9CAUL
Putative methyltransferase {ECO:0000313|EMBL:EJL22507.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
methyltransferase
SCN18_30_10_14_R5_P_scaffold_158_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9135..10052
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TP04_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP65093.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_158_10
SCNPILOT_CONT_750_P_Mesorhizobium_63_10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10049..10219)
DNA (171bp) protein (57aa)
UPF0391 membrane protein RC1_1636 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=Y1636_RHOCS
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_11
unknown

Not on your lists

10347..10502
DNA (156bp) protein (52aa)

This feature has no annotations

SCN18_30_10_14_R5_P_scaffold_158_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10518..10787)
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILF0_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10816..11127)
DNA (312bp) protein (104aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_14
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11203..12774)
DNA (1572bp) protein (524aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036881D3
Glutathione-binding protein GsiB {ECO:0000313|EMBL:CEJ10619.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
putative ABC transporter substrate-binding protein
SCN18_30_10_14_R5_P_scaffold_158_15
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12876..13430)
DNA (555bp) protein (185aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_16
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13474..13794)
DNA (321bp) protein (107aa)
CsbD family protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E2A3_9GAMM
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_17
unknown

Not on your lists

comp(13855..14013)
DNA (159bp) protein (53aa)

This feature has no annotations

SCN18_30_10_14_R5_P_scaffold_158_18
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14094..16682)
DNA (2589bp) protein (863aa)
Response regulator receiver domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A4H3_9PROT
sensory box sensor histidine kinase/response regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_19
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16675..18402)
DNA (1728bp) protein (576aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003728515
signal transduction histidine kinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_20
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18420..19223)
DNA (804bp) protein (268aa)
Two-component response regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S248_9SPHN
two-component response regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_21
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19437..19634)
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000301BD18
Uncharacterized protein {ECO:0000313|EMBL:AHY49481.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
hypothetical protein
SCN18_30_10_14_R5_P_scaffold_158_22
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19758..20222
DNA (465bp) protein (155aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDB1_PHEZH
ECF subfamily RNA polymerase sigma-70 factor
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_23
Paracoccus sp. 361_CN-SCN_Paracoccus_21x, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20344..20925
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036CC0F0
DNA-directed RNA polymerase sigma-E/Sigma-24/FecI
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_24
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21044..21274
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKP6_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_25
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21335..21610
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B559_9RHIZ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_26
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21805..22569
DNA (765bp) protein (255aa)
2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125); K00065 2-deoxy-D-gluconate 3-dehydrogenase [EC:1.1.1.125] id=14625654 bin=bin7_NC10_sister species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
kduD; 2-deoxy-D-gluconate 3-dehydrogenase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_27
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22576..23178)
DNA (603bp) protein (201aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_28
Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23245..23757)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000370673F
peptidase A24A prepilin type IV
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23780..23941)
DNA (162bp) protein (54aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_30_10_14_R5_P_scaffold_158_30
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24150..24767)
DNA (618bp) protein (206aa)
Phosphatidylglycerophosphate synthase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TJQ9_TISMK
ynjF; phosphatidylglycerophosphate synthase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying items 1-30 of 235 in total

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