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SCN18_14_9_16_R4_B_scaffold_7936

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_7936_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..731
DNA (729bp) protein (243aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
uracil-DNA glycosylase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037275A9
uracil-DNA glycosylase
SCN18_14_9_16_R4_B_scaffold_7936_2
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_363, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(767..1288)
DNA (522bp) protein (174aa)
2'-5' RNA ligase n=1 Tax=Burkholderia sp. TJI49 RepID=F0FX42_9BURK
2'-5' RNA ligase
2'-5' RNA ligase {ECO:0000313|EMBL:EGD06200.1}; TaxID=987057 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
SCN18_14_9_16_R4_B_scaffold_7936_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1438..1833)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Sphingobium chinhatense RepID=UPI0003698E6A
Uncharacterized protein {ECO:0000313|EMBL:KER36078.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_7936_4
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1893..2075)
DNA (183bp) protein (61aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
Phosphomethylpyrimidine synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YAZ9_9SPHN
thiC; thiamine biosynthesis protein ThiC
Displaying 4 items

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