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SCN18_14_9_16_R4_B_scaffold_2328

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2328_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..93
DNA (93bp) protein (31aa)
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase n=1 Tax=Caulobacter sp. AP07 RepID=J2H5S8_9CAUL
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase {ECO:0000313|EMBL:EJL30768.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase
SCN18_14_9_16_R4_B_scaffold_2328_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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294..1478
DNA (1185bp) protein (395aa)
phthalate 4,5-dioxygenase (EC:1.14.12.7)
Phthalate 4,5-dioxygenase {ECO:0000313|EMBL:ABQ70637.1}; EC=1.14.12.7 {ECO:0000313|EMBL:ABQ70637.1};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
phenoxybenzoate dioxygenase n=1 Tax=Sphingomonas wittichii RepID=UPI0002D44DC5
SCN18_14_9_16_R4_B_scaffold_2328_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1484..2824
DNA (1341bp) protein (447aa)
MFS transporter n=1 Tax=Sphingomonas wittichii RepID=UPI00035D00A0
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABQ70641.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_14_9_16_R4_B_scaffold_2328_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3120..5387
DNA (2268bp) protein (756aa)
TonB-dependent receptor n=2 Tax=Sphingomonas wittichii RepID=A5VEC6_SPHWW
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ABQ70642.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_14_9_16_R4_B_scaffold_2328_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5576..6412)
DNA (837bp) protein (279aa)
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM49 RepID=J3A6Z9_9PSED
Transcriptional regulator {ECO:0000313|EMBL:EJM61033.1}; TaxID=1144331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM49.;"
IclR family transcription regulator
SCN18_14_9_16_R4_B_scaffold_2328_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6501..7784
DNA (1284bp) protein (428aa)
phthalate 4,5-dioxygenase, partial n=1 Tax=Sphingomonas wittichii RepID=UPI000363E7DA
phthalate 4,5-dioxygenase
Phthalate 4,5-dioxygenase {ECO:0000313|EMBL:AJC17890.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
Displaying 6 items

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