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SCN18_14_9_16_R4_B_scaffold_2560

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2560_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..481
DNA (480bp) protein (160aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:EZP52703.1}; EC=2.1.1.77 {ECO:0000313|EMBL:EZP52703.1};; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
protein-L-isoaspartate O-methyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CAB2F
protein-L-isoaspartate O-methyltransferase
SCN18_14_9_16_R4_B_scaffold_2560_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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546..1022
DNA (477bp) protein (159aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
purE; N5-carboxyaminoimidazole ribonucleotide mutase (EC:5.4.99.18)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B657A1
SCN18_14_9_16_R4_B_scaffold_2560_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1019..2086
DNA (1068bp) protein (356aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
phosphoribosylaminoimidazole carboxylase (EC:4.1.1.21)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037179D9
SCN18_14_9_16_R4_B_scaffold_2560_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2233..2529)
DNA (297bp) protein (99aa)
signal peptide protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B37A26
Uncharacterized protein {ECO:0000313|EMBL:EZP56172.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
signal peptide protein
SCN18_14_9_16_R4_B_scaffold_2560_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2519..5356)
DNA (2838bp) protein (946aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003697B79
DNA, contig: SP620 {ECO:0000313|EMBL:GAN13542.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
peptidase M16
SCN18_14_9_16_R4_B_scaffold_2560_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5506..5970
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000381D051
Sphingomonas taxi strain 30a NODE_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26758.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
MarR family transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_2560_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5958..7148
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000360DB8D
Efflux transporter, outer membrane factor (OMF) lipo, NodT family protein {ECO:0000313|EMBL:EZP51662.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
RND transporter
Displaying 7 items

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