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SCN18_14_9_16_R4_B_scaffold_2960

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_2960_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..316
DNA (315bp) protein (105aa)
peptidase M48 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC11A
peptidase M48
Peptidase M48 {ECO:0000313|EMBL:AIT06169.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_2960_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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313..1035
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036F3742
DSBA-like thioredoxin domain protein {ECO:0000313|EMBL:EZP55332.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
DSBA oxidoreductase
SCN18_14_9_16_R4_B_scaffold_2960_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1032..1964
DNA (933bp) protein (311aa)
ABC transporter family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTS8_9SPHN
ABC transporter family protein {ECO:0000313|EMBL:EZP55331.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
multidrug ABC transporter ATP-binding protein
SCN18_14_9_16_R4_B_scaffold_2960_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1961..2722
DNA (762bp) protein (254aa)
ABC-2 type transporter family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTS9_9SPHN
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_2960_5
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2737..3501)
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:AHE53326.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
SCN18_14_9_16_R4_B_scaffold_2960_6
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3573..4094)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003749B4F
Uncharacterized protein {ECO:0000313|EMBL:AHE53325.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
acetyltransferase
SCN18_14_9_16_R4_B_scaffold_2960_7
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4219..4674)
DNA (456bp) protein (152aa)
AsnC family transcriptional regulator n=1 Tax=Rhizobium sp. Pop5 RepID=K0VVR2_9RHIZ
AsnC family transcriptional regulator {ECO:0000313|EMBL:EJZ22836.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
AsnC family transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_2960_8
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4735..5943)
DNA (1209bp) protein (403aa)
megL; methionine gamma-lyase (EC:4.4.1.11)
methionine gamma-lyase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5DBC7
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
Displaying 8 items

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