ggKbase home page

SCN18_14_9_16_R4_B_scaffold_3063

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_3063_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..417)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B74075
DNA, contig: SP604 {ECO:0000313|EMBL:GAN12189.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_3063_2
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(509..1081)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI00037D113E
Sphingomonas taxi strain 30a NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28045.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
chap
SCN18_14_9_16_R4_B_scaffold_3063_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1222..2715)
DNA (1494bp) protein (498aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000382DF8C
Sphingomonas taxi strain 30a NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28046.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Na+/melibiose symporter-like protein
SCN18_14_9_16_R4_B_scaffold_3063_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2712..3539)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036D86C6
Putative oxidoreductase {ECO:0000313|EMBL:GAO40328.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
short-chain dehydrogenase/reductase SDR
SCN18_14_9_16_R4_B_scaffold_3063_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3690..4478
DNA (789bp) protein (263aa)
3-oxoacyl-ACP reductase n=1 Tax=Sphingomonas melonis RepID=UPI0003710CD1
Sphingomonas taxi strain 30a NODE_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28047.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
3-oxoacyl-ACP reductase
SCN18_14_9_16_R4_B_scaffold_3063_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5078..5509
DNA (432bp) protein (144aa)
Rrf2 family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDCEF
Rrf2 family protein {ECO:0000313|EMBL:EZP54595.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
Rrf2 family transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_3063_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5552..5905)
DNA (354bp) protein (118aa)
large conductance mechanosensitive channel protein MscL n=2 Tax=Sphingomonas melonis RepID=UPI00036958FC
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
mechanosensitive ion channel protein MscL
Displaying 7 items

View Taxonomy