ggKbase home page

SCN18_14_9_16_R4_B_scaffold_3351

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_3351_1
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..970
DNA (969bp) protein (323aa)
Amidohydrolase 2 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G618_NOVAD
amidohydrolase
Tax=BJP_IG2102_Porphyrobacter_62_18
SCN18_14_9_16_R4_B_scaffold_3351_2
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

Not on your lists

967..2004
DNA (1038bp) protein (346aa)
Alcohol dehydrogenase superfamily, zinc-containing n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5C5_NOVAD
Threonine dehydrogenase and related Zn-dependent dehydrogenases {ECO:0000313|EMBL:GAO55563.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
alcohol dehydrogenase
SCN18_14_9_16_R4_B_scaffold_3351_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2047..2646)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6E060
Putative integral membrane protein {ECO:0000313|EMBL:KEZ19362.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_3351_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2777..3586)
DNA (810bp) protein (270aa)
linocin M18 bacteriocin protein (EC:3.4.-.-)
Photosynthetic reaction center L subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H1G4_9BRAD
Bacteriocin {ECO:0000313|EMBL:KJC59637.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
SCN18_14_9_16_R4_B_scaffold_3351_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3588..4616)
DNA (1029bp) protein (343aa)
Iron-dependent peroxidase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP43_AGRRK
iron-dependent peroxidase
Peroxidase {ECO:0000313|EMBL:KEA08335.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCN18_14_9_16_R4_B_scaffold_3351_6
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4722..5420)
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EFR3_9SPHN
metallophosphoesterase
Uncharacterized protein {ECO:0000313|EMBL:EHJ59841.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
Displaying 6 items

View Taxonomy