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SCN18_14_9_16_R4_B_scaffold_1257

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_1257_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1144
DNA (1143bp) protein (381aa)
ATPase-like protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCI7_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:GAO39246.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ATPase-like protein
SCN18_14_9_16_R4_B_scaffold_1257_2
CN-SCN_Acidovorax_22x, CN-SCN_Acidovorax_22x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1353..2417
DNA (1065bp) protein (355aa)
Pirin family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNZ8_9SPHN
Pirin family protein {ECO:0000313|EMBL:GAD50317.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
pirin
SCN18_14_9_16_R4_B_scaffold_1257_3
Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2419..3315
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HDS7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11157.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
alcohol dehydrogenase zinc-binding domain-containing protein
SCN18_14_9_16_R4_B_scaffold_1257_4
Acinetobacter sp. Ver3, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3366..3956)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Trichosporon asahii var. asahii (strain CBS 8904) RepID=K1W173_TRIAC
Uncharacterized protein {ECO:0000313|EMBL:EZQ11918.1}; TaxID=466088 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. Ver3.;"
SCN18_14_9_16_R4_B_scaffold_1257_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4156..5052
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBP9_9SPHN
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EGD58025.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
LysR family transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_1257_6
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5241..6287
DNA (1047bp) protein (349aa)
membrane protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B69F7C
Membrane protein {ECO:0000313|EMBL:KJR61593.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1257_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6289..7464)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI0003734E76
Sphingomonas taxi strain 30a NODE_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29658.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Zn-dependent hydrolase
SCN18_14_9_16_R4_B_scaffold_1257_8
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7526..7978)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381EA12
Uncharacterized protein {ECO:0000313|EMBL:KHA63766.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_1257_9
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8060..9139
DNA (1080bp) protein (360aa)
hypothetical protein n=2 Tax=Sphingomonas melonis RepID=UPI00037AED15
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT08199.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1257_10
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9114..9785)
DNA (672bp) protein (224aa)
Transcriptional regulator, TetR family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T4R5_CAUSK
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABZ71017.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCN18_14_9_16_R4_B_scaffold_1257_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9975..10793
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003641F1E
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AIT07163.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1257_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10836..13025
DNA (2190bp) protein (730aa)
excinuclease ABC subunit B n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B2FEA9
excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_14_9_16_R4_B_scaffold_1257_13
unknown

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comp(13145..13357)
DNA (213bp) protein (71aa)

This feature has no annotations

SCN18_14_9_16_R4_B_scaffold_1257_14
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13444..13716
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD28
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP74098.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
Displaying 14 items

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