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SCN18_14_9_16_R4_B_scaffold_726

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_726_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1646
DNA (1644bp) protein (548aa)
Sulfatase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UPV1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETW96267.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
sulfatase
SCN18_14_9_16_R4_B_scaffold_726_2
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

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1753..2190
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YYZ2_9SYNE
Uncharacterized protein {ECO:0000313|EMBL:EAQ74747.1}; TaxID=69042 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. WH 5701.;"
putative translation initiation inhibitor
SCN18_14_9_16_R4_B_scaffold_726_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2274..4508)
DNA (2235bp) protein (745aa)
Putative TonB-dependent receptor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y462_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KGB55567.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
outer membrane receptor (OMR) family protein
SCN18_14_9_16_R4_B_scaffold_726_4
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4620..5876)
DNA (1257bp) protein (419aa)
oxidoreductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CAC26
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCN18_14_9_16_R4_B_scaffold_726_5
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6055..6540)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TPG6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KCZ47535.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B2.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_726_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6675..7184
DNA (510bp) protein (170aa)
Putative MarR family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHY7_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
SCN18_14_9_16_R4_B_scaffold_726_7
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7181..8356
DNA (1176bp) protein (392aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1)
Acyl-CoA dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VXJ8_9SPHN
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ENY80007.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
SCN18_14_9_16_R4_B_scaffold_726_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8410..9618)
DNA (1209bp) protein (403aa)
Tat (Twin-arginine translocation) pathway signal sequence domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X3G8_9SPHN
DNA, contig: SP638 {ECO:0000313|EMBL:GAN14414.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_726_9
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9629..11152)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C149_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EZP50779.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_726_10
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11251..12705)
DNA (1455bp) protein (485aa)
RND transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B32C0B
RND efflux system of outer membrane lipoprotein, nodT family {ECO:0000313|EMBL:GAO55213.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
RND efflux system outer membrane lipoprotein
SCN18_14_9_16_R4_B_scaffold_726_11
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12702..15962)
DNA (3261bp) protein (1087aa)
nodulation protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4D5E7
Cobalt-zinc-cadmium resistance protein czcA {ECO:0000313|EMBL:GAO55214.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
acriflavin resistance protein
SCN18_14_9_16_R4_B_scaffold_726_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15959..19129)
DNA (3171bp) protein (1057aa)
acriflavin resistance protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B61004
Acriflavin resistance protein {ECO:0000313|EMBL:GAO55215.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
acriflavin resistance protein
SCN18_14_9_16_R4_B_scaffold_726_13
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19126..20403)
DNA (1278bp) protein (426aa)
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B7A765
Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:GAO55216.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
efflux transporter, RND family, MFP subunit
Displaying 13 items

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