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SCN18_14_9_16_R4_B_scaffold_3436_3

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(2079..2807)

Top 3 Functional Annotations

Value Algorithm Source
Putative DNA-binding transcriptional regulator n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q2T1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 227.0
  • Bit_score: 340
  • Evalue 1.30e-90
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CCM78940.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 227.0
  • Bit_score: 340
  • Evalue 1.80e-90
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 204.0
  • Bit_score: 264
  • Evalue 1.90e-68

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
GTGCTGCGGCAGGCCGATCAGTTCAAGGCGCGGGCGCGCGATCTGGCGAGCGGGGTCGAGCCCGAATTGTCGATCGCGCTCGACGTGATGTTCCCGCTCGAACTGTTCACCGCCGCGGTCGCCGAGTTCGGGCAGATGTTTCCCGATACCGCGCTGCGCGTTTACGTCGAAAATCTCGGCGCGGTGATCCAGCCGGTGCTCGATCGACGCTGTTCGTTCGCGGTATCGGGCACGCTGCCGCTGTTCCCGCCCGAACTGGCGCGCGAACGACTGGTGGCGATCCGCCTGATCCCGGTCGCCGCGCCCGGTCACCCGCTGGCGCAGCTCGCTGGCCCCTTGTCGCGCGAGCAGCTCGCCGATCATGTCCAGCTGGTGCTGACCGACCGTTCGGTCTTGTCCGAGGGCAAGAATTTCGGGGTGTTCGCCGAGCGCGTCTGGCGGCTCGCCGATCTCGGCGCGAAGCACGCCTTCCTGCGTGCGGGGCTGGGCTGGGGCAGCATGCCGGTGCCGATGGTTTACGCCGATCTCGCCGCCGGGCGGCTGGTCGAGCTCGATGTCGCGCGCGATATCTGGCCCGAGGGCGATCAACTCGCGATGTTCGCGCTCCACCGCCACGATGCGCCGCCCGGCCCGGCGGGGCGCTGGCTGATCGAGCGGCTGCACGATCGCGTGCAGCAATGCCCGGCCGAGGCGAAGGGTGCGCCGGCGGGACGTTTCATCGTGACGTGA
PROTEIN sequence
Length: 243
VLRQADQFKARARDLASGVEPELSIALDVMFPLELFTAAVAEFGQMFPDTALRVYVENLGAVIQPVLDRRCSFAVSGTLPLFPPELARERLVAIRLIPVAAPGHPLAQLAGPLSREQLADHVQLVLTDRSVLSEGKNFGVFAERVWRLADLGAKHAFLRAGLGWGSMPVPMVYADLAAGRLVELDVARDIWPEGDQLAMFALHRHDAPPGPAGRWLIERLHDRVQQCPAEAKGAPAGRFIVT*