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SCN18_14_9_16_R4_B_scaffold_3436

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R4_B_scaffold_3436_1
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1105
DNA (1104bp) protein (368aa)
monooxygenase n=1 Tax=Sphingomonas melonis RepID=UPI00037AC57A
Sphingomonas taxi strain 30a NODE_8, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30213.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
amine oxidase
SCN18_14_9_16_R4_B_scaffold_3436_2
SCNPILOT_CONT_750_P_Burkholderiales_64_62, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1053..2033)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IP56_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11419.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
2-dehydropantoate 2-reductase
SCN18_14_9_16_R4_B_scaffold_3436_3
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2079..2807)
DNA (729bp) protein (243aa)
Putative DNA-binding transcriptional regulator n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q2T1_9RHIZ
Putative DNA-binding transcriptional regulator {ECO:0000313|EMBL:CCM78940.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
LysR family transcriptional regulator
SCN18_14_9_16_R4_B_scaffold_3436_4
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3100..3708
DNA (609bp) protein (203aa)
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
FMN-dependent NADH-azoreductase n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PQM3_9RHIZ
azoR; FMN-dependent NADH-azoreductase
SCN18_14_9_16_R4_B_scaffold_3436_5
unknown

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comp(3768..4043)
DNA (276bp) protein (92aa)

This feature has no annotations

SCN18_14_9_16_R4_B_scaffold_3436_6
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4156..6675)
DNA (2520bp) protein (840aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. LH128 RepID=J8VTX4_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:EZP83777.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
TonB-dependent receptor
SCN18_14_9_16_R4_B_scaffold_3436_7
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7004..7723
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9A8R3_CAUCR
Uncharacterized protein {ECO:0000313|EMBL:EZP67442.1}; Flags: Precursor;; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
hypothetical protein
SCN18_14_9_16_R4_B_scaffold_3436_8
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7744..8073)
DNA (330bp) protein (110aa)
AsnC family transcriptional regulator n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IJN9_9SPHN
AsnC family transcriptional regulator {ECO:0000313|EMBL:EQB09854.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
ybaO; Leucine-responsive regulatory protein
Displaying 8 items

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