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SCN18_14_9_16_R4_B_scaffold_3436_6

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(4156..6675)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingomonas sp. LH128 RepID=J8VTX4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 842.0
  • Bit_score: 1181
  • Evalue 0.0
TonB-dependent receptor {ECO:0000313|EMBL:EZP83777.1}; Flags: Precursor;; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 842.0
  • Bit_score: 1183
  • Evalue 0.0
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 846.0
  • Bit_score: 1156
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_300_BF_Novosphingobium_63_58 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2520
ATGCGGGTAATTATGAGCCTGCGCGCTCAGCTGTTGCTGGGCGGCGCATTGCTGGCGGCTGTGGCTTCGCCGGCCATGGCGGCGAGTGAAGCGGCGCCGGTTGCCGAGCCGGCCAGCGACAGTCAGGGTCTCGTCGATATCGTCGTCACCGCGACCAAGCGCGAGACCAACCTCCAGACGACGCCGATCTCGATGAGCGTCGTCAACACCACGATGATCAAGGATCGCCACGTCCAGAGCCTGTTCGATCTGGCCGACGGCGGCGTTCCCTCGCTCCGCGTCACCACCTTCGAGGCGCGTCAGTCGGCGCTGACCATCGGCATCCGCGGTATCGTGCCGCTCGACGCCAACCAGCCCGCGCGCGAACAGGGCGTCGGCGTCTATATCGACGGCGTGTATCTCGGCCGCCAGCACGGCCTGAACGCGGCGCTGTTCGACGTCGAGCGCGTCGAGGTGCTGAAGGGGCCGCAGGGCACGTTGTTCGGCCGCAATACCGAGGGTGGCGCGCTCTCGATCGTCACCAAGGCGCCGACCGGCGAATTCGGCGGGCGCATCGAGGGCGGCTTCGGCAATCTCGGTGCCTATAGCGGCGCGGCGCATATCGATCTGCCCGAATATCAGAATGTCTCGATCAAGATCGACGCGGTGAAGCAATATCAGGGGCCGACGACGAAGAACCCGATGCCCGGCCAGACCGGCTGGGGCTATTATGATCGTCAGGGCGGCCGCATCGCCGTCCGCTGGCAGCCGACGGCCAATATCACCAACGACTTTTCCTTCGACGTTGCGCAGGACAAGAATTCGCCGTTCTACAGCCAGTTGCTGAAGTATAATCCTTATGGTTGCGCCCCCGGCCCGCAGGCCGCCGCGCCCAATTGCGTGCTGCCCGGCACCAATTATTCGACCCTTACCGGCACCTTGCGCCCGATCGGCCCCGGCGTCGTGATCAACGGCGATACGCTGATGCGCACCGCCGATATCGGCGTGCCGCAGCAGCCCAGCGTCGACAAGACGCACGGCTTCACCAACAGCTTCAAATGGAAGCTGGCGCCGGAACTGGAAATCCGCTCGATCACCGCATGGCGCGGGGTCGATGTCGCGCAATGGGATAATGCTGGTGGCGCGCACCGTCCGCCGGTGCTCGCGATCGATCGCAACCCGGTCACCGGGCTGTTCCCCACCACCGTTCCGTTCAGCCGCTACAGCCTGGCGAATTTGCGCCAGCGCCAGTTCAGCCAGGAATTGCAGGCGGTCGGCTCGATCAGCAGCGTCGATTATGTCGCGGGGCTATTCTATTTCAACGAACATGTGAGCGACGACGCTGCCACCCCCAATTCCAATCTGTGGAACGTCAATCCGAACACCGGCGCGGTCACCGGCTATTCGGTCAATCCGGTGGTGTTCACCAATCCGTTCGCCAATATCGACCGCGCGTCGGAAGTCTGGTCGAAAAGCTATGCGGTCTACGGTCAGGCGACCTGGCATGCGACCGATACGCTGCACCTCACCGTCGGCGGCCGCTACACGCATGACAAGAAGAAGGGCGTGCTGCGCGTCGCCAGCGGCGTCAATTATGATGCCAATCCGGCGCAGGCCGCGCTACGCGGCTACCGCCCGCTCGATCGCAGCTGGAACCGGTTCAACCCGATGGTCATCTTGGCCTATGACGTGAATGCCGACGTCCACGTCTTCGCCAAATATGCCACCGGCTATCGCGCCGGCGGCGCCAGCTCGCGCACGATCAACTATCAGCCGTTCAATCCCGAGGATGTGAAATCCTATGAAGTCGGGCTGAAGGCGGATTTCTGGAACCGCCGCGCGCGCTTCAACCTGACCGGCTATATCATGGACCGCAAGGACAGCCAGGTCGACATCAACAGCTTCCTGTATCTTGGCTCCAGCACCTATAATAATCTGGAGACGATCAACCTGCCCGGCAACGCCAAGATCCGCGGGATCGAAGCGGATCTGACGGTGCATCCGATCGACGGGCTGACGCTCAACGCCAGCTATGCTTATACTTATACCAAGCTGCCGCTGACGCCGATCACCTACACTGCGCGCAATGCCGCCGGTGCGGTGACCGATCAGACCACCGTCATGCAGCAATTCTATATCGTGTTCACCCCGCGCAACGCGGCGAGCGGCGCGATCGATTATGCCGTGCCGATCGGCGGCGGCGATACCAAGCTGCGCTTCCACCTTGACGGCAATTATGCGCAGTCGACGCAGACCTTCGACGCTTATGCCACGCGCAACGACGCCTCTTTGGTGTTCAACGGCCGTATCTCGCTGGCGGATATCGAGATGAGCGGCGGCGGGCAGAAGCTGACCATCGGCCTGTGGGGGCGCAATCTGTTCAACACGCAATATGTCTATCGTCGTGACCCGACGCAGGCGCTGCCGGGGGCACCGACCTCGACCAATGTGCGCTCGGGCAGCATCGGCAACGTGCTGGGCGAATACGGCAATTTCAACATGCCGCGGACCTATGGCGTGGATGCGTCGTTCAGCTTCTGA
PROTEIN sequence
Length: 840
MRVIMSLRAQLLLGGALLAAVASPAMAASEAAPVAEPASDSQGLVDIVVTATKRETNLQTTPISMSVVNTTMIKDRHVQSLFDLADGGVPSLRVTTFEARQSALTIGIRGIVPLDANQPAREQGVGVYIDGVYLGRQHGLNAALFDVERVEVLKGPQGTLFGRNTEGGALSIVTKAPTGEFGGRIEGGFGNLGAYSGAAHIDLPEYQNVSIKIDAVKQYQGPTTKNPMPGQTGWGYYDRQGGRIAVRWQPTANITNDFSFDVAQDKNSPFYSQLLKYNPYGCAPGPQAAAPNCVLPGTNYSTLTGTLRPIGPGVVINGDTLMRTADIGVPQQPSVDKTHGFTNSFKWKLAPELEIRSITAWRGVDVAQWDNAGGAHRPPVLAIDRNPVTGLFPTTVPFSRYSLANLRQRQFSQELQAVGSISSVDYVAGLFYFNEHVSDDAATPNSNLWNVNPNTGAVTGYSVNPVVFTNPFANIDRASEVWSKSYAVYGQATWHATDTLHLTVGGRYTHDKKKGVLRVASGVNYDANPAQAALRGYRPLDRSWNRFNPMVILAYDVNADVHVFAKYATGYRAGGASSRTINYQPFNPEDVKSYEVGLKADFWNRRARFNLTGYIMDRKDSQVDINSFLYLGSSTYNNLETINLPGNAKIRGIEADLTVHPIDGLTLNASYAYTYTKLPLTPITYTARNAAGAVTDQTTVMQQFYIVFTPRNAASGAIDYAVPIGGGDTKLRFHLDGNYAQSTQTFDAYATRNDASLVFNGRISLADIEMSGGGQKLTIGLWGRNLFNTQYVYRRDPTQALPGAPTSTNVRSGSIGNVLGEYGNFNMPRTYGVDASFSF*