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SCN18_30_10_14_R1_B_scaffold_2089

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_2089_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..82)
DNA (81bp) protein (27aa)
SCN18_30_10_14_R1_B_scaffold_2089_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79..1137)
DNA (1059bp) protein (353aa)
Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase {ECO:0000313|EMBL:BAK65027.1}; EC=2.7.7.13 {ECO:0000313|EMBL:BAK65027.1};; EC=5.3.1.8 {ECO:0000313|EMBL:BAK65027.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyl transferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKG4_9SPHN
mannose-6-phosphate isomerase
SCN18_30_10_14_R1_B_scaffold_2089_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1238..2221)
DNA (984bp) protein (328aa)
Flp pilus assembly protein TadC n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKG5_9SPHN
Flp pilus assembly protein TadC
Flp pilus assembly protein TadC {ECO:0000313|EMBL:BAK65028.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2089_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2237..3235)
DNA (999bp) protein (333aa)
Flp pilus assembly protein TadB n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKG6_9SPHN
Flp pilus assembly protein TadB
Flp pilus assembly protein TadB {ECO:0000313|EMBL:BAK65029.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2089_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3303..4604)
DNA (1302bp) protein (434aa)
Flp pilus assembly protein ATPase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKG7_9SPHN
cpaE; Flp pilus assembly protein ATPase
Flp pilus assembly protein ATPase {ECO:0000313|EMBL:BAK65030.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2089_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4606..5262)
DNA (657bp) protein (219aa)
Flp pilus assembly protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKG8_9SPHN
cpaD; Flp pilus assembly protein
Flp pilus assembly protein {ECO:0000313|EMBL:BAK65031.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2089_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5280..6806)
DNA (1527bp) protein (509aa)
Flp pilus assembly protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKG9_9SPHN
cpaC; Flp pilus assembly protein
Flp pilus assembly protein {ECO:0000313|EMBL:BAK65032.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2089_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6808..7824)
DNA (1017bp) protein (339aa)
Flp pilus assembly protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKH0_9SPHN
cpaB; Flp pilus assembly protein
Flp pilus assembly protein {ECO:0000313|EMBL:BAK65033.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2089_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7878..8351)
DNA (474bp) protein (158aa)
Flp pilus assembly protein protease {ECO:0000313|EMBL:BAK65034.1}; EC=3.4.23.43 {ECO:0000313|EMBL:BAK65034.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Flp pilus assembly protein protease n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKH1_9SPHN
cpaA; Flp pilus assembly protein protease
SCN18_30_10_14_R1_B_scaffold_2089_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8455..9591
DNA (1137bp) protein (379aa)
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKH2_9SPHN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK65035.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2089_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9675..9851
DNA (177bp) protein (59aa)
UPI0003D67458 related cluster n=1 Tax=unknown RepID=UPI0003D67458
Uncharacterized protein {ECO:0000313|EMBL:ETI64851.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2089_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9898..10500)
DNA (603bp) protein (201aa)
Cytochrome c n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKH3_9SPHN
cytochrome c
Cytochrome c {ECO:0000313|EMBL:BAK65036.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2089_13
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10647..11201
DNA (555bp) protein (185aa)
MarR family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKH4_9SPHN
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:BAK65037.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2089_14
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11328..12293
DNA (966bp) protein (322aa)
Putative glycerate dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKH5_9SPHN
putative glycerate dehydrogenase
Putative glycerate dehydrogenase {ECO:0000313|EMBL:BAK65038.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2089_15
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12294..13523
DNA (1230bp) protein (410aa)
Putative glycerate kinase {ECO:0000313|EMBL:BAK65039.1}; EC=2.7.1.31 {ECO:0000313|EMBL:BAK65039.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative glycerate kinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKH6_9SPHN
putative glycerate kinase
SCN18_30_10_14_R1_B_scaffold_2089_16
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13749..14678
DNA (930bp) protein (310aa)
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase {ECO:0000313|EMBL:BAK65914.1}; EC=1.14.11.- {ECO:0000313|EMBL:BAK65914.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQP2_9SPHN
tfdA; alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate dioxygenase
SCN18_30_10_14_R1_B_scaffold_2089_17
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14807..14914
DNA (108bp) protein (36aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00035F5E69
Uncharacterized protein {ECO:0000313|EMBL:KEO87652.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. JL475.;"
glyoxalase II
Displaying 17 items

View Taxonomy