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SCN18_30_10_14_R1_B_scaffold_2391

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_2391_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..400
DNA (399bp) protein (133aa)
Multidrug resistance efflux pump n=1 Tax=Sphingomonas sp. LH128 RepID=J8SHG0_9SPHN
Multidrug resistance efflux pump {ECO:0000313|EMBL:EJU12264.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
multidrug ABC transporter permease
SCN18_30_10_14_R1_B_scaffold_2391_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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402..1982
DNA (1581bp) protein (527aa)
DSBA oxidoreductase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B72323
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34442.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
putative MFS permease
SCN18_30_10_14_R1_B_scaffold_2391_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1982..3394
DNA (1413bp) protein (471aa)
RND transporter n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5EABC
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34441.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
oprN; outer membrane protein OprN
SCN18_30_10_14_R1_B_scaffold_2391_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3422..4060)
DNA (639bp) protein (213aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B475CF
Putative TetR family transcriptional regulator {ECO:0000313|EMBL:GAD50280.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
TetR family transcriptional regulator
SCN18_30_10_14_R1_B_scaffold_2391_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4163..4459)
DNA (297bp) protein (99aa)
Plasmid stabilization protein n=1 Tax=Sphingobium baderi LL03 RepID=T0G853_9SPHN
Plasmid stabilization protein {ECO:0000313|EMBL:EQA96801.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2391_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4564..5301)
DNA (738bp) protein (246aa)
Putative phosphatase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IHZ4_9SPHN
MFS transporter {ECO:0000313|EMBL:KEZ15978.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
putative phosphatase
SCN18_30_10_14_R1_B_scaffold_2391_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5298..7226)
DNA (1929bp) protein (643aa)
Sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase {ECO:0000313|EMBL:BAK66918.1}; EC=2.7.1.25 {ECO:0000313|EMBL:BAK66918.1};; EC=2.7.7.4 {ECO:0000313|EMBL:BAK66918.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Sulfate adenylyltransferase subunit 1/adenylyl-sulfate kinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IHZ5_9SPHN
cysNC; sulfate adenylyltransferase
SCN18_30_10_14_R1_B_scaffold_2391_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7360..8265)
DNA (906bp) protein (302aa)
Sulfate adenylyltransferase {ECO:0000256|SAAS:SAAS00055732}; EC=2.7.7.4 {ECO:0000256|SAAS:SAAS00055732};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Sulfate adenylyltransferase subunit 2 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IHZ6_9SPHN
cysD; sulfate adenylyltransferase subunit 2
SCN18_30_10_14_R1_B_scaffold_2391_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8429..10471)
DNA (2043bp) protein (681aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031BF9B9
amidohydrolase
Amidohydrolase {ECO:0000313|EMBL:AHX15547.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCN18_30_10_14_R1_B_scaffold_2391_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10660..12726)
DNA (2067bp) protein (689aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
DNA topoisomerase 1 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IHZ7_9SPHN
topA; DNA topoisomerase I
Displaying 10 items

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