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SCN18_30_10_14_R1_B_scaffold_2700

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_2700_1
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(2..1291)
DNA (1290bp) protein (430aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F256_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:AJR23222.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
major facilitator superfamily protein
SCN18_30_10_14_R1_B_scaffold_2700_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1430..4357)
DNA (2928bp) protein (976aa)
TonB-dependent receptor plug n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2C3_SPHCR
TonB-dependent receptor {ECO:0000313|EMBL:AJR23229.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
TonB-dependent receptor plug
SCN18_30_10_14_R1_B_scaffold_2700_3
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5059..5469
DNA (411bp) protein (137aa)
elongation factor GreAB n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488E95
Regulator of nucleoside diphosphate kinase {ECO:0000313|EMBL:AJW29297.1}; TaxID=908605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NS2.;"
rnk; putative regulator of nucleoside diphosphate kinase
SCN18_30_10_14_R1_B_scaffold_2700_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5535..7937)
DNA (2403bp) protein (801aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW5_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK67135.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_2700_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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8135..9355
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037981F6
ABC transporter permease {ECO:0000313|EMBL:EZQ16439.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
major facilitator superfamily protein
SCN18_30_10_14_R1_B_scaffold_2700_6
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9492..10673
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F1S6_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:KEQ53598.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2700_7
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10679..11209
DNA (531bp) protein (177aa)
Glycosyl transferase family 2 n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F1S5_SPHCR
Glycosyl transferase family 2 {ECO:0000313|EMBL:KEQ53597.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
family 2 glycosyl transferase
SCN18_30_10_14_R1_B_scaffold_2700_8
SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11235..12818
DNA (1584bp) protein (528aa)
Glycosyl transferase family 2 n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F1S5_SPHCR
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:KEQ53597.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
SCN18_30_10_14_R1_B_scaffold_2700_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13444..14367)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KLJ9_9SPHN
Putative integrase {ECO:0000313|EMBL:KEZ19451.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
putative integrase
Displaying 9 items

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