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SCN18_30_10_14_R1_B_scaffold_2811

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_2811_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..412
DNA (411bp) protein (137aa)
Transcriptional regulator n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RF74_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP70777.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_30_10_14_R1_B_scaffold_2811_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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530..2971
DNA (2442bp) protein (814aa)
TonB-dependent receptor n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B80E
Uncharacterized protein {ECO:0000313|EMBL:KGO99912.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2811_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2917..3711
DNA (795bp) protein (265aa)
TonB-dependent receptor n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262B80E
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO40681.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
TonB-dependent receptor
SCN18_30_10_14_R1_B_scaffold_2811_4
CN-SCN_Cytophagaceae_12x, CN-SCN_Cytophagaceae_12x, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3774..4682
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI0003748552
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:KGO99894.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
glycerophosphoryl diester phosphodiesterase
SCN18_30_10_14_R1_B_scaffold_2811_5
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4752..5798)
DNA (1047bp) protein (349aa)
sulfatase family protein (EC:3.1.6.-)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001013-O16 RepID=UPI0003600602
Arylsulfatase A family protein {ECO:0000313|EMBL:EJL22577.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
SCN18_30_10_14_R1_B_scaffold_2811_6
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6651..9500
DNA (2850bp) protein (950aa)
TonB-dependent receptor n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZUU8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AJP73442.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_2811_7
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9500..10660
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Colwellia piezophila RepID=UPI00037957B9
sulfatase
Sulfatase {ECO:0000313|EMBL:ADY52607.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Displaying 7 items

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