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SCN18_30_10_14_R1_B_scaffold_5001

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_5001_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(58..990)
DNA (933bp) protein (311aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Lipoyl synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISW8_9SPHN
lipA; lipoyl synthase
SCN18_30_10_14_R1_B_scaffold_5001_2
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1056..1697
DNA (642bp) protein (214aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Carbonic anhydrase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISW9_9SPHN
carbonic anhydrase
SCN18_30_10_14_R1_B_scaffold_5001_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1690..2073
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISX0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66480.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_5001_4
SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, SCNPILOT_EXPT_750_BF_Burkholderiales_68_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2152..2433
DNA (282bp) protein (94aa)
acyP; acylphosphatase (EC:3.6.1.7)
acylphosphatase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000362636A
Acylphosphatase {ECO:0000313|EMBL:KFG90147.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
SCN18_30_10_14_R1_B_scaffold_5001_5
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2474..2935
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CD769
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIT05494.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_30_10_14_R1_B_scaffold_5001_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3041..4720)
DNA (1680bp) protein (560aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISX2_9SPHN
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAK66482.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_5001_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4994..5203
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISX3_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66483.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_5001_trna_1
unknown

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5338..5411
DNA (74bp)
transferRNA Pro
SCN18_30_10_14_R1_B_scaffold_5001_8
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5451..5645)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KCA5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB31138.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_5001_9
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6790..7395)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0003606957
Uncharacterized protein {ECO:0000313|EMBL:KFG88727.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
hypothetical protein
Displaying 10 items

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