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SCN18_30_10_14_R1_B_scaffold_5982

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_5982_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..1367
DNA (1365bp) protein (455aa)
Putative succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:BAK65955.1}; EC=1.2.1.- {ECO:0000313|EMBL:BAK65955.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative succinate-semialdehyde dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT3_9SPHN
putative succinate-semialdehyde dehydrogenase
SCN18_30_10_14_R1_B_scaffold_5982_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1486..2538
DNA (1053bp) protein (351aa)
5-carboxyvanillate decarboxylase n=2 Tax=Sphingomonadaceae RepID=G2IQT4_9SPHN
ligW2; 5-carboxyvanillate decarboxylase
5-carboxyvanillic acid decarboxylse {ECO:0000313|EMBL:BAC56975.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
SCN18_30_10_14_R1_B_scaffold_5982_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2535..4154
DNA (1620bp) protein (540aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT5_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK65957.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_5982_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4833..5897
DNA (1065bp) protein (355aa)
Choline dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQT6_9SPHN
choline dehydrogenase
Choline dehydrogenase {ECO:0000313|EMBL:BAK65958.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_5982_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6105..7073)
DNA (969bp) protein (323aa)
AraC family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ65_9SPHN
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:BAK67235.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_5982_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7239..9251
DNA (2013bp) protein (671aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ64_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK67234.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_5982_7
unknown

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9294..9413
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 7 items

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