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SCN18_30_10_14_R1_B_scaffold_9769

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_9769_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..241)
DNA (240bp) protein (80aa)
Hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITP5_9SPHN
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAK66755.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_9769_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(238..978)
DNA (741bp) protein (247aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITP6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66756.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_9769_3
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1272..1658
DNA (387bp) protein (129aa)
Response regulator receiver protein n=1 Tax=Marichromatium purpuratum 984 RepID=F9U2J7_MARPU
Uncharacterized protein {ECO:0000313|EMBL:KKC27087.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
chemotaxis protein CheY
SCN18_30_10_14_R1_B_scaffold_9769_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1671..2810)
DNA (1140bp) protein (380aa)
Putative glycosyltransferase {ECO:0000313|EMBL:BAK66757.1}; EC=2.4.-.- {ECO:0000313|EMBL:BAK66757.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative glycosyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITP7_9SPHN
putative glycosyltransferase
SCN18_30_10_14_R1_B_scaffold_9769_5
SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, SCNPILOT_EXPT_300_BF_Thiobacillus_62_448, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3143..4351
DNA (1209bp) protein (403aa)
SCN18_30_10_14_R1_B_scaffold_9769_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4419..5102
DNA (684bp) protein (228aa)
PgsA-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITP9_9SPHN
PgsA-like protein
PgsA-like protein {ECO:0000313|EMBL:BAK66759.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_9769_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5563..5772
DNA (210bp) protein (70aa)
Cold-shock protein n=1 Tax=Sphingobium baderi LL03 RepID=T0I3T9_9SPHN
Cold-shock protein {ECO:0000313|EMBL:EQB04294.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
cold-shock DNA-binding protein family protein
SCN18_30_10_14_R1_B_scaffold_9769_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6185..6388
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IMH8_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67767.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_9769_9
unknown

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6385..6606
DNA (222bp) protein (74aa)

This feature has no annotations

SCN18_30_10_14_R1_B_scaffold_9769_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6653..7879)
DNA (1227bp) protein (409aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:BAK66761.1}; EC=5.1.3.14 {ECO:0000313|EMBL:BAK66761.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITQ1_9SPHN
wecB; UDP-N-acetylglucosamine 2-epimerase
SCN18_30_10_14_R1_B_scaffold_9769_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7879..9030)
DNA (1152bp) protein (384aa)
Dihydropteroate synthase {ECO:0000313|EMBL:BAK66766.1}; EC=2.5.1.15 {ECO:0000313|EMBL:BAK66766.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Dihydropteroate synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ITQ6_9SPHN
folP; dihydropteroate synthase
SCN18_30_10_14_R1_B_scaffold_9769_12
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9107..9505)
DNA (399bp) protein (133aa)
SnoaL-like polyketide cyclase n=1 Tax=Mycobacterium chubuense (strain NBB4) RepID=I4BTD0_MYCCN
SnoaL-like polyketide cyclase
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:AFM20537.1}; TaxID=710421 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
SCN18_30_10_14_R1_B_scaffold_9769_13
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9573..10466)
DNA (894bp) protein (298aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Modification methylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II12_9SPHN
modification methylase
Displaying 13 items

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