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SCN18_30_10_14_R1_B_scaffold_9938

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_9938_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..485)
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQH3_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68347.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_9938_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(482..1060)
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQH3_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68347.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_9938_3
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1057..1626)
DNA (570bp) protein (190aa)
Carboxymuconolactone decarboxylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R8D4_PHEZH
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ETR76152.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
carboxymuconolactone decarboxylase
SCN18_30_10_14_R1_B_scaffold_9938_4
scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, scnpilot_dereplicated_Eukaryote_Rotifera_1, Eukaryote

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comp(1662..2426)
DNA (765bp) protein (255aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Chloroflexus RepID=A9WCF8_CHLAA
short-chain dehydrogenase/reductase SDR
Tax=RBG_13_Chloroflexi_54_8_curated
SCN18_30_10_14_R1_B_scaffold_9938_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2543..3514)
DNA (972bp) protein (324aa)
Choline dehydrogenase-like flavoprotein n=1 Tax=Rhizobium sp. CF080 RepID=J3BWU4_9RHIZ
choline dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCN18_30_10_14_R1_B_scaffold_9938_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4653..5102
DNA (450bp) protein (150aa)
Transcriptional regulator, MarR family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VED1_SPHWW
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ABQ70647.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_30_10_14_R1_B_scaffold_9938_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5353..5664
DNA (312bp) protein (104aa)
Ethyl tert-butyl ether degradation EthD n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V6J1_SPHWW
ethyl tert-butyl ether degradation EthD
Ethyl tert-butyl ether degradation EthD {ECO:0000313|EMBL:ABQ67907.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_30_10_14_R1_B_scaffold_9938_8
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5664..6044
DNA (381bp) protein (127aa)
Gamma-carboxymuconolactone decarboxylase protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IXH5_POLGS
Gamma-carboxymuconolactone decarboxylase
Gamma-carboxymuconolactone decarboxylase protein {ECO:0000313|EMBL:ADZ71598.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCN18_30_10_14_R1_B_scaffold_9938_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6136..7458
DNA (1323bp) protein (441aa)
Ring hydroxylating dioxygenase, alpha subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Q3_NOVAD
ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:AJP73847.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_30_10_14_R1_B_scaffold_9938_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7455..7952
DNA (498bp) protein (166aa)
Aromatic-ring-hydroxylating dioxygenase, beta subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7Q2_NOVAD
aromatic-ring-hydroxylating dioxygenase
Aromatic-ring-hydroxylating dioxygenase {ECO:0000313|EMBL:AJP73846.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
SCN18_30_10_14_R1_B_scaffold_9938_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7967..8896
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776, ECO:0000313|EMBL:AJP73845.1}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
2-dehydropantoate 2-reductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKV8_9SPHN
2-dehydropantoate 2-reductase
SCN18_30_10_14_R1_B_scaffold_9938_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8943..9749
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS42_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66202.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 12 items

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