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SCN18_30_10_14_R1_B_scaffold_4022

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_4022_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..193
DNA (192bp) protein (64aa)
Pyruvate phosphate dikinase {ECO:0000313|EMBL:ETI61578.1}; EC=2.7.9.1 {ECO:0000313|EMBL:ETI61578.1};; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
pyruvate phosphate dikinase (EC:2.7.9.1)
UPI0003D65CCB related cluster n=1 Tax=unknown RepID=UPI0003D65CCB
SCN18_30_10_14_R1_B_scaffold_4022_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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190..690
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630CD6
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ47687.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_4022_trna_1
unknown

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792..865
DNA (74bp)
transferRNA Arg
SCN18_30_10_14_R1_B_scaffold_4022_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1333..1593)
DNA (261bp) protein (87aa)
SCN18_30_10_14_R1_B_scaffold_4022_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1719..2225)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H287_METFK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE49400.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
SCN18_30_10_14_R1_B_scaffold_4022_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2395..3834
DNA (1440bp) protein (480aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=314225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis (strain HTCC2594).;"
Probable sensor protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NCJ5_ERYLH
sensor protein
SCN18_30_10_14_R1_B_scaffold_4022_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3827..4513
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0HNT9_9SPHN
Two component transcriptional regulator {ECO:0000313|EMBL:KHS42918.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
two component transcriptional regulator
SCN18_30_10_14_R1_B_scaffold_4022_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4769..5242)
DNA (474bp) protein (158aa)
Small heat shock protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II34_9SPHN
small heat shock protein
Small heat shock protein {ECO:0000313|EMBL:BAK66957.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4022_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5944..7194
DNA (1251bp) protein (417aa)
Lipoprotein-releasing system transmembrane protein LolC/E family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II33_9SPHN
lipoprotein-releasing system transmembrane protein LolC/E family protein
Lipoprotein-releasing system transmembrane protein LolC/E family protein {ECO:0000313|EMBL:BAK66956.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4022_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7187..7789
DNA (603bp) protein (201aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Lipoprotein-releasing system ATP-binding protein LolD n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II32_9SPHN
lolD; lipoprotein-releasing system ATP-binding protein LolD
SCN18_30_10_14_R1_B_scaffold_4022_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7837..8502
DNA (666bp) protein (222aa)
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II31_9SPHN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK66954.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4022_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8558..9724)
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II29_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66952.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4022_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9903..11609
DNA (1707bp) protein (569aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
DNA polymerase III alpha subunit n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II28_9SPHN
dnaE; DNA polymerase III subunit alpha
Displaying 13 items

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