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SCN18_30_10_14_R1_B_scaffold_4805

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_4805_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..184
DNA (183bp) protein (61aa)
Anthranilate synthase component II {ECO:0000313|EMBL:BAK67263.1}; EC=4.1.3.27 {ECO:0000313|EMBL:BAK67263.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Anthranilate synthase component II n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ93_9SPHN
trpG; anthranilate synthase component II
SCN18_30_10_14_R1_B_scaffold_4805_2
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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184..648
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4P9L0_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ83774.1}; TaxID=1121022 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896.;"
SCN18_30_10_14_R1_B_scaffold_4805_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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704..1702
DNA (999bp) protein (333aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Anthranilate phosphoribosyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ95_9SPHN
trpD; anthranilate phosphoribosyltransferase
SCN18_30_10_14_R1_B_scaffold_4805_4
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1735..2190
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRV5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66171.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4805_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2250..3038
DNA (789bp) protein (263aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Indole-3-glycerol phosphate synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ96_9SPHN
trpC; indole-3-glycerol phosphate synthase
SCN18_30_10_14_R1_B_scaffold_4805_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3035..3502
DNA (468bp) protein (156aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ97_9SPHN
moaC; molybdenum cofactor biosynthesis protein C
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4805_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3576..4781
DNA (1206bp) protein (402aa)
Molybdopterin biosynthesis protein MoeA n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ98_9SPHN
molybdopterin biosynthesis protein MoeA
Molybdopterin biosynthesis protein MoeA {ECO:0000313|EMBL:BAK67268.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_4805_8
unknown

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comp(4693..5847)
DNA (1155bp) protein (385aa)

This feature has no annotations

SCN18_30_10_14_R1_B_scaffold_4805_trna_1
unknown

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4878..4961
DNA (84bp)
transferRNA Leu
SCN18_30_10_14_R1_B_scaffold_4805_9
SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6057..6407
DNA (351bp) protein (117aa)
Integrase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MKH5_9SPHN
Integrase {ECO:0000313|EMBL:CCW17720.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
symbiosis island integrase
SCN18_30_10_14_R1_B_scaffold_4805_10
SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, SCNPILOT_SOLID2_TRIM150_Actinobacteria_69_241, Actinobacteria, Actinobacteria, Bacteria

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6790..8295
DNA (1506bp) protein (502aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QIL6_BRESC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL01349.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCN18_30_10_14_R1_B_scaffold_4805_11
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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8929..9336
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B2H8_9BACT
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_38_11_curated
SCN18_30_10_14_R1_B_scaffold_4805_12
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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9401..10207
DNA (807bp) protein (269aa)
Phosphomannose isomerase-like protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSR7_SPHAL
phosphomannose isomerase-like protein
Phosphomannose isomerase-like protein {ECO:0000313|EMBL:AJA09030.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
SCN18_30_10_14_R1_B_scaffold_4805_13
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10299..10409
DNA (111bp) protein (37aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036FD4B7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM02065.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Displaying 14 items

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