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SCN18_30_10_14_R1_B_scaffold_6484

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_6484_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1155
DNA (1155bp) protein (385aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:BAK66111.1}; EC=3.1.-.- {ECO:0000313|EMBL:BAK66111.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRP5_9SPHN
recJ; single-stranded-DNA-specific exonuclease RecJ
SCN18_30_10_14_R1_B_scaffold_6484_trna_1
unknown

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1250..1321
DNA (72bp)
transferRNA Glu
SCN18_30_10_14_R1_B_scaffold_6484_2
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1674..2465)
DNA (792bp) protein (264aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Osmosensitive K+ channel signal transduction histidine kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZE9_9SPHN
histidine kinase
SCN18_30_10_14_R1_B_scaffold_6484_3
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2431..3657)
DNA (1227bp) protein (409aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Osmosensitive K+ channel signal transduction histidine kinase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9VZE9_9SPHN
osmosensitive K+ channel signal transduction histidine kinase
SCN18_30_10_14_R1_B_scaffold_6484_4
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3693..4169
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA08 RepID=V8DNB2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KAK85140.1}; TaxID=1331212 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella holmesii CDC-H809-BH.;"
SCN18_30_10_14_R1_B_scaffold_6484_5
unknown

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4579..4668
DNA (90bp) protein (30aa)
SCN18_30_10_14_R1_B_scaffold_6484_6
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4684..6387
DNA (1704bp) protein (568aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Potassium-transporting ATPase A chain n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WA85_9SPHN
kdpA; potassium-transporting ATPase A chain
SCN18_30_10_14_R1_B_scaffold_6484_7
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6399..8093
DNA (1695bp) protein (565aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
Potassium-transporting ATPase B chain n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UQI7_9SPHN
K+-transporting ATPase subunit B
Displaying 8 items

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