name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_30_10_14_R1_B_scaffold_1303_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..490)
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR34_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68400.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_1303_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
501..1340
|
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR33_9SPHN
rsmI; ribosomal RNA small subunit methyltransferase I
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SCN18_30_10_14_R1_B_scaffold_1303_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1337..1699
|
UPF0102 protein SLG_37230 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR32_9SPHN
hypothetical protein
UPF0102 protein SLG_37230 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_1303_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
1849..2814
|
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Glutathione synthetase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR31_9SPHN
gshB; glutathione synthase
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SCN18_30_10_14_R1_B_scaffold_1303_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2911..3531
|
DedA-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR30_9SPHN
DedA-family protein
DedA-family protein {ECO:0000313|EMBL:BAK68396.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
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SCN18_30_10_14_R1_B_scaffold_1303_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3537..4433)
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Tyrosine recombinase XerC n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR28_9SPHN
xerC; tyrosine recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_1303_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4430..4885)
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Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR27_9SPHN
putative hydrolase
Putative hydrolase {ECO:0000313|EMBL:BAK68393.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_1303_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4882..5166)
|
BolA-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR26_9SPHN
BolA-like protein
BolA-like protein {ECO:0000313|EMBL:BAK68392.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_1303_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5218..5841
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR25_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68391.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_1303_10
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
5940..7238
|
molecular chaperone Hsp70 n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003656C81
Uncharacterized protein {ECO:0000313|EMBL:KFL48734.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. ba1.;"
molecular chaperone DnaK
|
|
SCN18_30_10_14_R1_B_scaffold_1303_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7299..8330
|
MoxR-like ATPase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR23_9SPHN
MoxR-like ATPase
MoxR-like ATPase {ECO:0000313|EMBL:BAK68389.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_1303_12
unknown
|
Not on your lists |
comp(8367..8741)
|
This feature has no annotations |
|
SCN18_30_10_14_R1_B_scaffold_1303_13
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9236..9832)
|
|
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SCN18_30_10_14_R1_B_scaffold_1303_14
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10068..11894
|
Cobalamin biosynthesis protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR19_9SPHN
cobalamin biosynthesis protein
Cobalamin biosynthesis protein {ECO:0000313|EMBL:BAK68385.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_1303_15
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11931..12632)
|
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR13_9SPHN
msrA; peptide methionine sulfoxide reductase MsrA
|
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SCN18_30_10_14_R1_B_scaffold_1303_16
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12780..13982)
|
Aspartate transaminase {ECO:0000313|EMBL:BAK68377.1}; EC=2.6.1.1 {ECO:0000313|EMBL:BAK68377.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Aspartate transaminase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IR11_9SPHN
aspB; aspartate transaminase
|
|
SCN18_30_10_14_R1_B_scaffold_1303_17
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14060..14704)
|
Para-aminobenzoate synthetase component I n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQK2_9SPHN
para-aminobenzoate synthetase component I
Para-aminobenzoate synthetase component I {ECO:0000313|EMBL:BAK68376.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCN18_30_10_14_R1_B_scaffold_1303_18
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14701..15894)
|
Para-aminobenzoate synthetase component I n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQK1_9SPHN
para-aminobenzoate synthetase component I
Para-aminobenzoate synthetase component I {ECO:0000313|EMBL:BAK68375.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_1303_19
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16014..16715
|
Major facilitator superfamily permease n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2EA13_9BURK
Major facilitator superfamily permease {ECO:0000313|EMBL:EKZ96195.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
protein NnrU
|
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SCN18_30_10_14_R1_B_scaffold_1303_20
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16721..17656)
|
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQJ8_9SPHN
prsA; ribose-phosphate pyrophosphokinase
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SCN18_30_10_14_R1_B_scaffold_1303_21
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17804..19468
|
Putative glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:BAK68371.1}; EC=6.3.5.1 {ECO:0000313|EMBL:BAK68371.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative glutamine-dependent NAD(+) synthetase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQJ7_9SPHN
nadE; putative glutamine-dependent NAD(+) synthetase
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SCN18_30_10_14_R1_B_scaffold_1303_22
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19474..20817
|
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Glutamate--tRNA ligase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQJ6_9SPHN
gltX; glutamyl-tRNA synthetase
|
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SCN18_30_10_14_R1_B_scaffold_1303_23
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21132..21800
|
TonB-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQJ5_9SPHN
TonB-like protein
TonB-like protein {ECO:0000313|EMBL:BAK68369.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
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SCN18_30_10_14_R1_B_scaffold_1303_24
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21854..22420
|
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQJ4_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68368.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
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SCN18_30_10_14_R1_B_scaffold_1303_25
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22423..23418
|
Diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:BAK68367.1}; EC=1.1.1.193 {ECO:0000313|EMBL:BAK68367.1};; EC=3.5.4.26 {ECO:0000313|EMBL:BAK68367.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Riboflavin biosynthesis protein RibD n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQJ3_9SPHN
ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase
|
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SCN18_30_10_14_R1_B_scaffold_1303_26
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24095..25387
|
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:BAK68364.1}; EC=4.1.99.12 {ECO:0000313|EMBL:BAK68364.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQJ0_9SPHN
ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase
|
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SCN18_30_10_14_R1_B_scaffold_1303_27
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25398..26249
|
Hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQI9_9SPHN
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAK68363.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_1303_28
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26278..26700
|
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQI8_9SPHN
ribH; 6,7-dimethyl-8-ribityllumazine synthase
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SCN18_30_10_14_R1_B_scaffold_1303_29
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria
|
Not on your lists |
comp(26731..27504)
|
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035F1C20
Uncharacterized protein {ECO:0000313|EMBL:KHK91856.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
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SCN18_30_10_14_R1_B_scaffold_1303_30
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27470..28543)
|
12-oxophytodienoate reductase (EC:1.3.1.42)
NADH:flavin oxidoreductase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B450D8
N-ethylmaleimide reductase {ECO:0000313|EMBL:EPX60693.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
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