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SCN18_30_10_14_R1_B_scaffold_1985

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_1985_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1458
DNA (1458bp) protein (486aa)
Putative hydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRN2_9SPHN
putative hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
SCN18_30_10_14_R1_B_scaffold_1985_2
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1772..2194)
DNA (423bp) protein (141aa)
OsmC family protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VAJ3_SPHWW
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ABQ69309.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCN18_30_10_14_R1_B_scaffold_1985_3
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria

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comp(2227..3240)
DNA (1014bp) protein (338aa)
lipase (EC:3.1.1.-)
Lipase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AIY3_RHIFH
Lipase / esterase {ECO:0000313|EMBL:KEC80244.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
SCN18_30_10_14_R1_B_scaffold_1985_4
SCN_Comamonas_36x, SCN_Comamonas_36x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3313..3816
DNA (504bp) protein (168aa)
Transcriptional regulator n=1 Tax=Sphingobium sp. AP49 RepID=J2W8T5_9SPHN
Transcriptional regulator {ECO:0000313|EMBL:EJK79020.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
MarR family transcriptional regulator
SCN18_30_10_14_R1_B_scaffold_1985_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

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4321..5034
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KSQ4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EED36002.1}; TaxID=565045 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Luminiphilus.;" source="Luminiphilus syltensis NOR5-1B.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_1985_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5706..8210
DNA (2505bp) protein (835aa)
TonB-dependent receptor-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS41_9SPHN
TonB-dependent receptor-like protein
TonB-dependent receptor-like protein {ECO:0000313|EMBL:BAK66201.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_1985_7
SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, SCNPILOT_CONT_1000_P_Pseudonocardia_72_23, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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8358..9575
DNA (1218bp) protein (406aa)
metE2; 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B9Z4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:ETW94340.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
SCN18_30_10_14_R1_B_scaffold_1985_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9652..10386
DNA (735bp) protein (245aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T8Y6_CAUSK
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABZ72903.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCN18_30_10_14_R1_B_scaffold_1985_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10388..11260
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G5M0_9BRAD
NADPH:quinone reductase {ECO:0000313|EMBL:KJC40601.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_1985_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11257..12051
DNA (795bp) protein (265aa)
2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC:4.1.1.77)
2-oxo-hepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:ABQ70653.1}; EC=4.1.1.77 {ECO:0000313|EMBL:ABQ70653.1};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
2-oxo-hept-3-ene-1,7-dioate hydratase n=1 Tax=Sphingomonas wittichii RepID=UPI0003628343
SCN18_30_10_14_R1_B_scaffold_1985_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12051..13016
DNA (966bp) protein (322aa)
Transcriptional regulator, AraC family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T8Y9_CAUSK
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ABZ72906.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCN18_30_10_14_R1_B_scaffold_1985_12
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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13027..14394
DNA (1368bp) protein (456aa)
Major facilitator superfamily MFS_1 n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QIM3_BRESC
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADL01356.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCN18_30_10_14_R1_B_scaffold_1985_13
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14438..15265)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA015-O19 RepID=UPI000376191B
Uncharacterized protein {ECO:0000313|EMBL:KEJ88297.1}; TaxID=1300350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565.;"
transcriptional regulator, IclR family
SCN18_30_10_14_R1_B_scaffold_1985_14
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16002..17192
DNA (1191bp) protein (397aa)
Putative acyl-CoA transferase n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4Z7J1_SPHJU
putative acyl-CoA transferase
Putative acyl-CoA transferase {ECO:0000313|EMBL:BAI98460.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCN18_30_10_14_R1_B_scaffold_1985_15
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17189..17680
DNA (492bp) protein (164aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:AJP72669.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AJP72669.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
enoyl-CoA hydratase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B69A13
Displaying 15 items

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