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SCN18_30_10_14_R1_B_scaffold_3046

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3046_1
unknown

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3..194
DNA (192bp) protein (64aa)

This feature has no annotations

SCN18_30_10_14_R1_B_scaffold_3046_2
SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, SCNPILOT_CONT_1000_P_Verrucomicrobia_61_8, Verrucomicrobia

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549..1220
DNA (672bp) protein (224aa)
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
DNA polymerase III alpha subunit n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FYV3_9FIRM
Marine sediment metagenome DNA, contig: S01H1_S12840 {ECO:0000313|EMBL:GAF99995.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCN18_30_10_14_R1_B_scaffold_3046_3
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1265..1777)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003157A2D
Transcriptional regulator {ECO:0000313|EMBL:EWY36463.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
transcriptional regulator
SCN18_30_10_14_R1_B_scaffold_3046_4
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2267..2812
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000377B5FF
Uncharacterized protein {ECO:0000313|EMBL:ENY82067.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
phospholipid phosphatase
SCN18_30_10_14_R1_B_scaffold_3046_5
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2821..3420
DNA (600bp) protein (200aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG93834.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCN18_30_10_14_R1_B_scaffold_3046_6
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3417..4700
DNA (1284bp) protein (428aa)
SCN18_30_10_14_R1_B_scaffold_3046_7
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4703..5488
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI000370F61A
Uncharacterized protein {ECO:0000313|EMBL:KIF12024.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3046_8
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5498..6850
DNA (1353bp) protein (451aa)
HCP oxidoreductase (EC:1.14.12.17)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003735C8C
FAD-binding oxidoreductase {ECO:0000313|EMBL:ETI65131.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
SCN18_30_10_14_R1_B_scaffold_3046_9
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6876..7604)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI0002D2A42A
Uncharacterized protein {ECO:0000313|EMBL:KHA62935.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3046_10
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7611..10526)
DNA (2916bp) protein (972aa)
Conjugal transfer relaxase TraA n=1 Tax=Sphingomonas sp. LH128 RepID=J8VPN8_9SPHN
Conjugal transfer relaxase TraA {ECO:0000313|EMBL:EZP70181.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
conjugal transfer protein TraA
SCN18_30_10_14_R1_B_scaffold_3046_11
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10700..11023
DNA (324bp) protein (108aa)
conjugal transfer protein TraD n=1 Tax=Sphingomonas melonis RepID=UPI00037504EE
conjugal transfer protein TraD
Conjugal transfer protein TraD {ECO:0000313|EMBL:AIT08508.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
SCN18_30_10_14_R1_B_scaffold_3046_12
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11043..11270
DNA (228bp) protein (76aa)
conjugal transfer protein TraD n=1 Tax=Gluconacetobacter europaeus RepID=UPI0002FA452A
Conjugal transfer protein TraD {ECO:0000313|EMBL:KHA62921.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
conjugal transfer protein TraD
SCN18_30_10_14_R1_B_scaffold_3046_13
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11267..11533
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI000301C106
Uncharacterized protein {ECO:0000313|EMBL:EZP70178.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
Displaying 13 items

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