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SCN18_30_10_14_R1_B_scaffold_3106

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3106_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..847
DNA (846bp) protein (282aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Porphobilinogen deaminase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIP5_9SPHN
hemC; porphobilinogen deaminase
SCN18_30_10_14_R1_B_scaffold_3106_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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844..1536
DNA (693bp) protein (231aa)
Uroporphyrinogen-III synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIP6_9SPHN
uroporphyrinogen-III synthase
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:BAK64726.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3106_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1509..2495
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIP7_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK64727.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3106_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2503..2898)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIP8_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK64728.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3106_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3003..4127)
DNA (1125bp) protein (375aa)
Oligopeptidase B {ECO:0000313|EMBL:BAK64734.1}; EC=3.4.21.83 {ECO:0000313|EMBL:BAK64734.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Oligopeptidase B n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIQ4_9SPHN
ptrB; oligopeptidase B
SCN18_30_10_14_R1_B_scaffold_3106_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4221..5075)
DNA (855bp) protein (285aa)
Oligopeptidase B {ECO:0000313|EMBL:BAK64734.1}; EC=3.4.21.83 {ECO:0000313|EMBL:BAK64734.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Oligopeptidase B n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIQ4_9SPHN
ptrB; oligopeptidase B
SCN18_30_10_14_R1_B_scaffold_3106_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5224..5619
DNA (396bp) protein (132aa)
SCN18_30_10_14_R1_B_scaffold_3106_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5620..6087)
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIQ2_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK64732.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3106_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6170..8020
DNA (1851bp) protein (617aa)
Putative M24B family peptidase {ECO:0000313|EMBL:BAK64731.1}; EC=3.4.-.- {ECO:0000313|EMBL:BAK64731.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative M24B family peptidase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIQ1_9SPHN
putative M24B family peptidase
SCN18_30_10_14_R1_B_scaffold_3106_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8042..8662)
DNA (621bp) protein (207aa)
Hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIQ0_9SPHN
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAK64730.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3106_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8659..9456)
DNA (798bp) protein (266aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIP9_9SPHN
mutM; formamidopyrimidine-DNA glycosylase/DNA-(apurinic or apyrimidinic site) lyase
Displaying 11 items

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