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SCN18_30_10_14_R1_B_scaffold_3144

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3144_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..419
DNA (417bp) protein (139aa)
Prokaryotic cytochrome b561 family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WWZ0_9SPHN
Putative cytochrome b561 {ECO:0000313|EMBL:GAM00521.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
cytochrome B561
SCN18_30_10_14_R1_B_scaffold_3144_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(423..1070)
DNA (648bp) protein (216aa)
Hypothetical membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IT31_9SPHN
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAK66541.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3144_3
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1215..1664
DNA (450bp) protein (150aa)
DoxX family protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI0003712970
Uncharacterized protein {ECO:0000313|EMBL:GAO53367.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
DoxX family protein
SCN18_30_10_14_R1_B_scaffold_3144_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1682..1888
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:GAO53366.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3144_5
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1961..3367
DNA (1407bp) protein (469aa)
MFS family transporter n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IKY1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53365.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
MFS family transporter
SCN18_30_10_14_R1_B_scaffold_3144_6
unknown

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3450..3974
DNA (525bp) protein (175aa)

This feature has no annotations

SCN18_30_10_14_R1_B_scaffold_3144_7
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4023..5183
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI00036B69C2
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCN18_30_10_14_R1_B_scaffold_3144_8
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5237..6484
DNA (1248bp) protein (416aa)
Major facilitator superfamily protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKN8_9SPHN
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAK67440.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3144_9
SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, SCNPILOT_CONT_1000_BF_Chloroflexi_54_27, Bacteria

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comp(6493..7506)
DNA (1014bp) protein (338aa)
Alcohol dehydrogenase, zinc-binding protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11E73_MESSB
zinc-binding alcohol dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCN18_30_10_14_R1_B_scaffold_3144_10
SCNpilot_BF_INOC_Bordetella_67_10, SCNpilot_BF_INOC_Bordetella_67_10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7846..8955
DNA (1110bp) protein (370aa)
L-threonine 3-dehydrogenase n=1 Tax=Burkholderia sp. JPY251 RepID=UPI00037C329E
L-threonine 3-dehydrogenase
L-threonine 3-dehydrogenase {ECO:0000313|EMBL:AKC69450.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
SCN18_30_10_14_R1_B_scaffold_3144_11
SCN_Rubrivivax_15x, SCN_Rubrivivax_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8965..9336)
DNA (372bp) protein (124aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C1I1_9XANT
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EGD20637.1}; Flags: Precursor;; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas gardneri ATCC 19865.;"
hydrolase
Displaying 11 items

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