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SCN18_30_10_14_R1_B_scaffold_3572

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3572_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1359)
DNA (1359bp) protein (453aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
2-isopropylmalate synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ62_9SPHN
leuA; 2-isopropylmalate synthase
SCN18_30_10_14_R1_B_scaffold_3572_2
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1606..2034
DNA (429bp) protein (143aa)
blue-light sensor BLUF n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B622A9
Uncharacterized protein {ECO:0000313|EMBL:KKC24146.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3572_3
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2155..3561
DNA (1407bp) protein (469aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ61_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67231.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3572_4
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3599..4531
DNA (933bp) protein (311aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ60_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67230.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3572_5
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4858..5400
DNA (543bp) protein (181aa)
Transglutaminase-like protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ59_9SPHN
transglutaminase
Transglutaminase-like protein {ECO:0000313|EMBL:BAK67229.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3572_6
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5447..6184
DNA (738bp) protein (246aa)
Peptidase T1 family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ58_9SPHN
peptidase T1 family protein
Peptidase T1 family protein {ECO:0000313|EMBL:BAK67228.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3572_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6353..7315
DNA (963bp) protein (321aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Thioredoxin reductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ56_9SPHN
trxB; thioredoxin reductase
SCN18_30_10_14_R1_B_scaffold_3572_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7477..7779)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ55_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67225.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3572_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8049..8336)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ54_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67224.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3572_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8471..10003
DNA (1533bp) protein (511aa)
Enterobactin synthetase component F n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ52_9SPHN
enterobactin synthetase component F
Enterobactin synthetase component F {ECO:0000313|EMBL:BAK67222.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3572_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10000..11244
DNA (1245bp) protein (415aa)
Diaminopimelate decarboxylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ51_9SPHN
diaminopimelate decarboxylase
Diaminopimelate decarboxylase {ECO:0000313|EMBL:BAK67221.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3572_12
SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11314..12951
DNA (1638bp) protein (546aa)
Asparagine synthase (Glutamine-hydrolysing) {ECO:0000313|EMBL:BAK67211.1}; EC=6.3.5.4 {ECO:0000313|EMBL:BAK67211.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Asparagine synthetase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ41_9SPHN
asnB; asparagine synthase
Displaying 12 items

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