name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_30_10_14_R1_B_scaffold_3674_1
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2..418
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRD4_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68500.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_3674_2
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(670..3072)
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Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRD3_9SPHN
pheT; phenylalanyl-tRNA synthetase subunit beta
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SCN18_30_10_14_R1_B_scaffold_3674_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3069..4166)
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Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRD2_9SPHN
pheS; phenylalanyl-tRNA synthetase subunit alpha
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SCN18_30_10_14_R1_B_scaffold_3674_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4261..4881)
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Homoserine/homoserine lactone efflux protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MJ74_9SPHN
Homoserine/homoserine lactone efflux protein {ECO:0000313|EMBL:CCW16824.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
LysE-family transporter
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SCN18_30_10_14_R1_B_scaffold_3674_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5045..5410)
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50S ribosomal protein L20 n=4 Tax=Sphingobium RepID=D4Z6Q5_SPHJU
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
rplT; ribosomal protein L20
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SCN18_30_10_14_R1_B_scaffold_3674_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5424..5627)
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50S ribosomal protein L35 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRD0_9SPHN
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_3674_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
5909..6700
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UspA family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRC9_9SPHN
UspA family protein
UspA family protein {ECO:0000313|EMBL:BAK68495.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_3674_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6860..7435
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Nitroreductase family protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MG98_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE52864.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
putative nitroreductase
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SCN18_30_10_14_R1_B_scaffold_3674_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7439..7750)
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Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRC8_9SPHN
glnD; [protein-PII] uridylyltransferase
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_3674_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(7732..10161)
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Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRC8_9SPHN
glnD; [protein-PII] uridylyltransferase
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_3674_11
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(10271..12796)
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DNA mismatch repair protein MutS n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MSC0_9SPHN
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
DNA mismatch repair protein MutS
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SCN18_30_10_14_R1_B_scaffold_3674_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
12966..15248
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NADP-dependent malic enzyme {ECO:0000313|EMBL:BAK68492.1}; EC=1.1.1.40 {ECO:0000313|EMBL:BAK68492.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
NADP-dependent malic enzyme n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRC6_9SPHN
maeB; NADP-dependent malic enzyme
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SCN18_30_10_14_R1_B_scaffold_3674_13
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(15608..16390)
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRC5_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68491.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_3674_14
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(16578..17069)
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Putative small protein A n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRC4_9SPHN
putative small protein A
Putative small protein A {ECO:0000313|EMBL:BAK68490.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_3674_15
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
17226..17741
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRC3_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68489.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_3674_16
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
17745..18284
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IRC2_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68488.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_3674_17
SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, SCNPILOT_CONT_1000_P_Alphaproteobacteria_novel_41_6_7, Bacteria
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Not on your lists |
18462..18617
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hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035FC1CB
Endonuclease {ECO:0000313|EMBL:KER36367.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
putative endonuclease
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