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SCN18_30_10_14_R1_B_scaffold_3708

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3708_1
unknown

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comp(2..73)
DNA (72bp) protein (24aa)

This feature has no annotations

SCN18_30_10_14_R1_B_scaffold_3708_2
CN-SCN_Sphingomonas_18x, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(183..836)
DNA (654bp) protein (218aa)
3-oxoacid CoA-transferase, B subunit {ECO:0000313|EMBL:KFG90532.1}; EC=2.8.3.5 {ECO:0000313|EMBL:KFG90532.1};; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
3-oxoacid CoA-transferase subunit B n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S452_9SPHN
3-oxoacid CoA-transferase subunit B
SCN18_30_10_14_R1_B_scaffold_3708_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(836..1543)
DNA (708bp) protein (236aa)
3-oxoacid CoA-transferase subunit A {ECO:0000313|EMBL:BAK66310.1}; EC=2.8.3.5 {ECO:0000313|EMBL:BAK66310.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
3-oxoacid CoA-transferase subunit A n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISF0_9SPHN
scoA; 3-oxoacid CoA-transferase subunit A
SCN18_30_10_14_R1_B_scaffold_3708_4
CN-SCN_Phenylobacterium_31x, RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1673..2119)
DNA (447bp) protein (149aa)
acetyltransferase n=1 Tax=Rhizobium leguminosarum RepID=UPI000377AF5C
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EJT04063.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
N-acetyltransferase GCN5
SCN18_30_10_14_R1_B_scaffold_3708_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2229..2411)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISE6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66306.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3708_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2519..3313)
DNA (795bp) protein (265aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Thiazole synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISE5_9SPHN
thiS_thiG; thiazole biosynthesis protein ThiS/ThiG
SCN18_30_10_14_R1_B_scaffold_3708_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3384..3602)
DNA (219bp) protein (73aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
bifunctional sulfur carrier protein/thiazole synthase n=1 Tax=Sphingobium xenophagum RepID=UPI0002EE64C3
thiS_thiG; thiazole biosynthesis protein ThiS/ThiG
SCN18_30_10_14_R1_B_scaffold_3708_8
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3689..4132
DNA (444bp) protein (148aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
3-dehydroquinate dehydratase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISE4_9SPHN
3-dehydroquinate dehydratase
SCN18_30_10_14_R1_B_scaffold_3708_9
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4244..4741
DNA (498bp) protein (166aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein {ECO:0000313|EMBL:BAK66303.1}; EC=6.4.1.2 {ECO:0000313|EMBL:BAK66303.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISE3_9SPHN
accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
SCN18_30_10_14_R1_B_scaffold_3708_10
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4755..6107
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase biotin carboxylase {ECO:0000313|EMBL:BAK66302.1}; EC=6.3.4.14 {ECO:0000313|EMBL:BAK66302.1};; EC=6.4.1.2 {ECO:0000313|EMBL:BAK66302.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Acetyl-CoA carboxylase biotin carboxylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISE2_9SPHN
accC; acetyl-CoA carboxylase biotin carboxylase
SCN18_30_10_14_R1_B_scaffold_3708_11
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6112..6450
DNA (339bp) protein (113aa)
Arsenate reductase {ECO:0000256|RuleBase:RU362029}; EC=1.20.4.1 {ECO:0000256|RuleBase:RU362029};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative arsenate reductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISE0_9SPHN
putative arsenate reductase
SCN18_30_10_14_R1_B_scaffold_3708_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6922..7830)
DNA (909bp) protein (303aa)
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISD8_9SPHN
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAK66298.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 12 items

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