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SCN18_30_10_14_R1_B_scaffold_3722

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3722_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..351)
DNA (351bp) protein (117aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Dihydroxy-acid dehydratase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIV4_9SPHN
ilvD; dihydroxy-acid dehydratase
SCN18_30_10_14_R1_B_scaffold_3722_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(397..1113)
DNA (717bp) protein (239aa)
Putative N-formylglutamate amidohydrolase {ECO:0000313|EMBL:BAK67125.1}; EC=3.5.1.68 {ECO:0000313|EMBL:BAK67125.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative N-formylglutamate amidohydrolase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIV5_9SPHN
putative N-formylglutamate amidohydrolase
SCN18_30_10_14_R1_B_scaffold_3722_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1193..2017)
DNA (825bp) protein (275aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIV6_9SPHN
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
SCN18_30_10_14_R1_B_scaffold_3722_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2155..3558
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002888954
Uncharacterized protein {ECO:0000313|EMBL:GAO38791.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3722_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3555..3854)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00037C56D1
Uncharacterized protein {ECO:0000313|EMBL:KGD66714.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. 19-m-6.;"
antibiotic biosynthesis monooxygenase
SCN18_30_10_14_R1_B_scaffold_3722_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3884..5536)
DNA (1653bp) protein (551aa)
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIV9_9SPHN
electron-transferring-flavoprotein dehydrogenase
Electron-transferring-flavoprotein dehydrogenase {ECO:0000313|EMBL:BAK67129.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3722_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5650..6426
DNA (777bp) protein (259aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW0_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67130.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCN18_30_10_14_R1_B_scaffold_3722_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6423..7799
DNA (1377bp) protein (459aa)
Putative lytic transglycosylase {ECO:0000313|EMBL:BAK67131.1}; EC=3.2.1.- {ECO:0000313|EMBL:BAK67131.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative lytic transglycosylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIW1_9SPHN
putative lytic transglycosylase
Displaying 8 items

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