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SCN18_30_10_14_R1_B_scaffold_3726

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R1_B_scaffold_3726_1
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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231..659
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036E565B
Uncharacterized protein {ECO:0000313|EMBL:KER34483.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3726_2
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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964..1353
DNA (390bp) protein (130aa)
Single-stranded DNA-binding protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MS91_9SPHN
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
single-strand binding protein
SCN18_30_10_14_R1_B_scaffold_3726_3
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1469..1696)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MW98_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW19842.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3726_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2728..3057
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MX48_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW19843.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3726_5
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3047..5296
DNA (2250bp) protein (750aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036CD58D
IncW plasmid conjugative protein TrwB (TraD homolog) {ECO:0000313|EMBL:CCW19844.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
conjugal transfer protein TraD
SCN18_30_10_14_R1_B_scaffold_3726_6
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5413..8322
DNA (2910bp) protein (970aa)
IncW plasmid conjugative relaxase protein TrwC (TraI homolog) n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MRK4_9SPHN
IncW plasmid conjugative relaxase protein TrwC (TraI homolog) {ECO:0000313|EMBL:CCW19845.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
TrwC protein
SCN18_30_10_14_R1_B_scaffold_3726_7
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8390..9310
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MS96_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW19846.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
SCN18_30_10_14_R1_B_scaffold_3726_8
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9322..9957)
DNA (636bp) protein (212aa)
Peptidase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MWA3_9SPHN
Peptidase {ECO:0000313|EMBL:CCW19847.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
peptidase S24
SCN18_30_10_14_R1_B_scaffold_3726_9
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10077..10253
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N5K7_ERYLH
hypothetical protein
Tax=BJP_IG2102_Porphyrobacter_62_18
SCN18_30_10_14_R1_B_scaffold_3726_10
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10305..12473)
DNA (2169bp) protein (723aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1280949 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas adhaerens MHS-3.;"
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037EA86D
UvrD/REP helicase
SCN18_30_10_14_R1_B_scaffold_3726_11
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12470..12625)
DNA (156bp) protein (52aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00035F7937
SCN18_30_10_14_R1_B_scaffold_3726_12
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12622..13068)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UXB5_TERSS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV84139.1}; Flags: Precursor;; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
Displaying 12 items

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