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SCN18_30_10_14_R1_B_scaffold_4198_7

Organism: SCN18_30_10_14_R1_B_Sphingobium_66_9

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: 4323..4853

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 176.0
  • Bit_score: 327
  • Evalue 8.60e-87
Peptide deformylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ33_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 176.0
  • Bit_score: 327
  • Evalue 6.10e-87
def; peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 176.0
  • Bit_score: 327
  • Evalue 1.70e-87

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGGCCATCCGTCCCATCATCGAGACCCCGGATCCGCTGCTGCGGACCATATCGACGCCCGTCGAAGCGATCGACGACGAACTGCAAGTGCTGATCGACGACATGTTCGAGACCATGTACGACGCGCCGGGCATCGGCCTCGCGGCGATCCAGGTTGGCGTGCCCAAGCGCGTGCTGGTGATTGACCTGCAGGAGCCGGAATCGGACGAGGAAGGTGCGCCGCCGGTCAAGCGGCCTCTGGTCTTCATCAATCCGCAGATTCTTGAAGGCTCGGCCGACATGTCGGTCTATAATGAAGGCTGCCTCTCGGTGCCCGAGCAATATGCCGAGGTCGAGCGCCCCGCCCGCATCCGCGCGAGCTGGATGGACCGGCAGGGCCGCATCCACGAGGAGGAACTGGAAGGGCTGCTCGCCACCTGCCTCCAGCATGAGATGGATCATCTCGAAGGCATTCTCTTCATCGACCATCTCTCGCGCCTCAAGCGGGACATGCTGCTCAAGAAGCTGGCGAAGAGCCGCAAGGCCGCCTAA
PROTEIN sequence
Length: 177
MAIRPIIETPDPLLRTISTPVEAIDDELQVLIDDMFETMYDAPGIGLAAIQVGVPKRVLVIDLQEPESDEEGAPPVKRPLVFINPQILEGSADMSVYNEGCLSVPEQYAEVERPARIRASWMDRQGRIHEEELEGLLATCLQHEMDHLEGILFIDHLSRLKRDMLLKKLAKSRKAA*