name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCN18_30_10_14_R1_B_scaffold_4198_1
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
2..166
|
Asparagine synthase (Glutamine-hydrolysing) {ECO:0000313|EMBL:BAK67211.1}; EC=6.3.5.4 {ECO:0000313|EMBL:BAK67211.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Asparagine synthetase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ41_9SPHN
asnB; asparagine synthase
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SCN18_30_10_14_R1_B_scaffold_4198_2
Sphingopyxis sp. MC1_SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(191..601)
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Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ40_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK67210.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_4198_3
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(698..1438)
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tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
tRNA pseudouridine synthase A n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ39_9SPHN
truA; tRNA pseudouridine synthase A
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SCN18_30_10_14_R1_B_scaffold_4198_4
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1435..2328)
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Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Methionyl-tRNA formyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ38_9SPHN
fmt; methionyl-tRNA formyltransferase
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SCN18_30_10_14_R1_B_scaffold_4198_5
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2410..3000
|
Recombination protein RecR n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ37_9SPHN
recR; recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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SCN18_30_10_14_R1_B_scaffold_4198_6
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(3023..4084)
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L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:AKH43371.1}; EC=1.1.1.- {ECO:0000313|EMBL:AKH43371.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
Putative oxidoreductase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INN2_9SPHN
putative oxidoreductase
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SCN18_30_10_14_R1_B_scaffold_4198_7
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4323..4853
|
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Peptide deformylase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ33_9SPHN
def; peptide deformylase
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SCN18_30_10_14_R1_B_scaffold_4198_8
SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4927..5841)
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Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FKY9_9RHIZ
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCV13554.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
transcriptional regulator, LysR family
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SCN18_30_10_14_R1_B_scaffold_4198_9
SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, SCNPILOT_EXPT_1000_BF_Rhizobiales_63_7, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
6065..6559
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UPI0003CE8295 related cluster n=1 Tax=unknown RepID=UPI0003CE8295
Cupin {ECO:0000313|EMBL:ESY66607.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
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SCN18_30_10_14_R1_B_scaffold_4198_10
SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, SCNPILOT_CONT_1000_P_Gammaproteobacteria_novel_39_13, Gammaproteobacteria
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Not on your lists |
comp(6581..6946)
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Glyoxalase family protein n=4 Tax=Coxiella burnetii RepID=A9KCU8_COXBN
glyoxalase family protein
Glyoxalase family protein {ECO:0000313|EMBL:ABS78313.1}; TaxID=434922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Coxiellaceae; Coxiella.;" source="Coxiella burnetii (strain Dugway 5J108-111).;"
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SCN18_30_10_14_R1_B_scaffold_4198_11
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7112..8398)
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Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Citrate synthase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ31_9SPHN
gltA; citrate (Si)-synthase
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SCN18_30_10_14_R1_B_scaffold_4198_12
SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8447..9199)
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Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Glutamate--tRNA ligase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ30_9SPHN
gltX; glutamyl-tRNA synthetase
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SCN18_30_10_14_R1_B_scaffold_4198_13
SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
9207..9806
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Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WVG1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM03453.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
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SCN18_30_10_14_R1_B_scaffold_4198_14
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9787..11928
|
ComEC/Rec2-related protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IJ29_9SPHN
ComEC/Rec2-like protein
ComEC/Rec2-related protein {ECO:0000313|EMBL:BAK67199.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
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