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SCN18_10_11_15_R1_P_scaffold_40

Search features with annotation key words

Displaying items 1-30 of 247 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_10_11_15_R1_P_scaffold_40_1
unknown

Not on your lists

2..94
DNA (93bp) protein (31aa)

This feature has no annotations

SCN18_10_11_15_R1_P_scaffold_40_2
SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, SCNpilot_P_inoc_Sphingobacteriales_44_17, Bacteroidetes, Bacteria

Not on your lists

164..994
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Nesterenkonia sp. F RepID=UPI000255C890
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL81099.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCN18_10_11_15_R1_P_scaffold_40_3
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

Not on your lists

1218..2156
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BHI5_SANKS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ21905.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCN18_10_11_15_R1_P_scaffold_40_4
SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, SCNPILOT_EXPT_1000_BF_Rhodanobacter_Plasmid_63_42, Plasmid-like

Not on your lists

2153..4717
DNA (2565bp) protein (855aa)
Superfamily II helicase n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BHI4_SANKS
superfamily II helicase
Superfamily II helicase {ECO:0000313|EMBL:ACZ21904.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
SCN18_10_11_15_R1_P_scaffold_40_5
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4714..5436)
DNA (723bp) protein (241aa)
Putative PE-PGRS family protein {ECO:0000313|EMBL:CDK01064.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCN18_10_11_15_R1_P_scaffold_40_6
CN-SCN_Microbacterium_200x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5523..5774)
DNA (252bp) protein (84aa)
transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B369AB
DNA-binding protein {ECO:0000313|EMBL:KDA06873.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
SCN18_10_11_15_R1_P_scaffold_40_7
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(5792..6109)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VXY8_ARTAR
Uncharacterized protein {ECO:0000313|EMBL:KJL24886.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_40_8
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6116..6397)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VXY8_ARTAR
Leucobacter komagatae strain VKM ST2845 L_komagatae_47, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51307.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_40_9
CN-SCN_Microbacterium_18x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6398..6604)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 / Re117) RepID=E1VXY8_ARTAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBT76491.1}; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 /; Re117).;"
SCN18_10_11_15_R1_P_scaffold_40_10
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6601..7065)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Mycobacterium abscessus subsp. bolletii 1S-154-0310 RepID=I9CIC6_MYCAB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDP09171.1}; TaxID=1402967 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. hominissuis 101.;"
SCN18_10_11_15_R1_P_scaffold_40_11
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

Not on your lists

comp(7168..10242)
DNA (3075bp) protein (1025aa)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI00036AB4AE
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EIV93876.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_40_12
SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, SCNPILOT_SOLID2_TRIM150_Burkholderiales_66_35, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10244..10753)
DNA (510bp) protein (170aa)
hsdS; type I restriction enzyme, S subunit (EC:3.1.21.3)
hypothetical protein n=1 Tax=Frankia sp. BMG5.12 RepID=UPI0003758B2C
Restriction modification system DNA specificity domain protein {ECO:0000313|EMBL:EGV20291.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
SCN18_10_11_15_R1_P_scaffold_40_13
SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, SCNpilot_P_inoc_Phage_43_79, Phage

Not on your lists

comp(11446..12957)
DNA (1512bp) protein (504aa)
Type I restriction-modification system methyltransferase subunit n=1 Tax=Frankia sp. QA3 RepID=I9KI36_9ACTO
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:EIV93878.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
type I restriction-modification system, M subunit
SCN18_10_11_15_R1_P_scaffold_40_14
unknown

Not on your lists

13301..13768
DNA (468bp) protein (156aa)

This feature has no annotations

SCN18_10_11_15_R1_P_scaffold_40_15
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14045..14419)
DNA (375bp) protein (125aa)
HNH endonuclease domain protein n=3 Tax=Escherichia coli RepID=I2YC99_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EHS99062.1}; TaxID=883120 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5245.;"
HNH nuclease
SCN18_10_11_15_R1_P_scaffold_40_16
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

15353..15553
DNA (201bp) protein (67aa)
SCN18_10_11_15_R1_P_scaffold_40_17
unknown

Not on your lists

15570..15695
DNA (126bp) protein (42aa)

This feature has no annotations

SCN18_10_11_15_R1_P_scaffold_40_18
CN-SCN_Comamonas_56x, CN-SCN_Comamonas_56x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15807..17372
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BUY8_XYLCX
Uncharacterized protein {ECO:0000313|EMBL:CDQ45692.1}; TaxID=1795 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_40_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17564..18832
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9Q7_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74526.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCN18_10_11_15_R1_P_scaffold_40_20
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19107..19862
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000380C4E1
Resolvase, N terminal domain protein {ECO:0000313|EMBL:CCQ46033.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
SCN18_10_11_15_R1_P_scaffold_40_21
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19811..20479
DNA (669bp) protein (223aa)
sugar ABC transporter permease n=1 Tax=Microbacterium barkeri RepID=UPI000307655C
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:KJQ52833.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
binding-protein-dependent transport system inner membrane protein
SCN18_10_11_15_R1_P_scaffold_40_22
SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21078..21470
DNA (393bp) protein (131aa)
Beta-1,4-mannooligosaccharide phosphorylase {ECO:0000313|EMBL:KJL30270.1}; EC=2.4.1.- {ECO:0000313|EMBL:KJL30270.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
glycosylase n=1 Tax=Microbacterium barkeri RepID=UPI0002DAC0FE
putative glycosylase
SCN18_10_11_15_R1_P_scaffold_40_23
CN-SCN_Microbacterium_37x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

21549..22151
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B4X5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL17362.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
putative phosphohydrolase
SCN18_10_11_15_R1_P_scaffold_40_24
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22171..23949)
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. AK-YN10 RepID=U2A3C4_9MICC
LGFP repeat protein {ECO:0000313|EMBL:KJL17363.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_40_25
CN-SCN_Microbacterium_27x, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(23954..26551)
DNA (2598bp) protein (866aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
leucyl-tRNA synthetase n=1 Tax=Microbacterium barkeri RepID=UPI00036C0E20
leuS; leucyl-tRNA synthetase
SCN18_10_11_15_R1_P_scaffold_40_26
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

26697..27743
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D40B83
Uncharacterized protein {ECO:0000313|EMBL:KJL17365.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_40_27
SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

27740..28648
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003077CC8
Uncharacterized protein {ECO:0000313|EMBL:KJL17366.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_40_28
SCNPILOT_EXPT_1000_BF_Microbacterium_69_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

28719..30011
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Gordonia polyisoprenivorans NBRC 16320 RepID=H0R771_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJL17368.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCN18_10_11_15_R1_P_scaffold_40_29
SCNpilot_P_inoc_Microbacterium_67_17, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

30114..31925
DNA (1812bp) protein (604aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B3ECAD
Uncharacterized protein {ECO:0000313|EMBL:KJC63007.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
ICC protein
SCN18_10_11_15_R1_P_scaffold_40_30
Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31922..32290
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003469C5C
Uncharacterized protein {ECO:0000313|EMBL:EXJ52928.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
polyketide synthase
Displaying items 1-30 of 247 in total

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