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SCN18_26_2_15_R5_B_scaffold_1023

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_1023_1
CN-SCN_Mesorhizobium_20x, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1664)
DNA (1662bp) protein (554aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
putative phosphoketolase (EC:4.1.2.9)
Probable phosphoketolase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WV18_9BRAD
SCN18_26_2_15_R5_B_scaffold_1023_2
Agrobacterium albertimagni_CN-SCN_Agrobacterium_19x, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1740..2270)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036B1758
mscS; Small-conductance mechanosensitive channel
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:CCQ73275.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
SCN18_26_2_15_R5_B_scaffold_1023_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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2508..3395
DNA (888bp) protein (296aa)
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CR69_9BRAD
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) {ECO:0000313|EMBL:EJN10964.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
anti-sigma-factor antagonist
SCN18_26_2_15_R5_B_scaffold_1023_4
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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3406..3795
DNA (390bp) protein (130aa)
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I068_9BRAD
Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) {ECO:0000313|EMBL:EJN10963.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
anti-sigma-factor antagonist
SCN18_26_2_15_R5_B_scaffold_1023_5
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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3779..4183
DNA (405bp) protein (135aa)
anti-sigma regulatory factor n=1 Tax=Micromonospora sp. CNB394 RepID=UPI0003718EA4
Anti-sigma B factor RsbT {ECO:0000313|EMBL:EWM66506.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
anti-sigma regulatory factor, serine/threonine protein kinase
SCN18_26_2_15_R5_B_scaffold_1023_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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4189..5190
DNA (1002bp) protein (334aa)
Stage II sporulation protein E id=4374371 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Anti-sigma regulatory factor (Ser/Thr protein kinase) {ECO:0000313|EMBL:EJN10961.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
putative anti-sigma regulatory factor
SCN18_26_2_15_R5_B_scaffold_1023_7
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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5190..6947
DNA (1758bp) protein (586aa)
Signal transduction histidine kinase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WE55_9BRAD
histidine kinase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
SCN18_26_2_15_R5_B_scaffold_1023_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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6944..8938
DNA (1995bp) protein (665aa)
histidine kinase n=1 Tax=Pseudomonas stutzeri RepID=UPI0002E7F76A
Histidine kinase {ECO:0000313|EMBL:KJV36778.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
histidine kinase
SCN18_26_2_15_R5_B_scaffold_1023_9
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(8945..9511)
DNA (567bp) protein (189aa)
Putative cytochrome P460 n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ETP8_METSB
putative cytochrome P460
Putative cytochrome P460 {ECO:0000313|EMBL:ACK52400.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCN18_26_2_15_R5_B_scaffold_1023_10
unknown

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comp(9765..10223)
DNA (459bp) protein (153aa)

This feature has no annotations

SCN18_26_2_15_R5_B_scaffold_1023_11
CN-SCN_Arenimonas_307x, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10544..10849
DNA (306bp) protein (102aa)
DNA-binding protein, H-NS family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ27_9RHOB
DNA-binding protein, H-NS family protein {ECO:0000313|EMBL:EAP77358.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhibens ISM.;"
histone-like nucleoid-structuring protein H-NS
SCN18_26_2_15_R5_B_scaffold_1023_12
Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10921..11304)
DNA (384bp) protein (128aa)
deoxyribonuclease (EC:3.1.25.1)
Endonuclease V n=2 Tax=Brucella RepID=E0DRE8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KFL26227.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
SCN18_26_2_15_R5_B_scaffold_1023_13
SCNpilot_P_inoc_Rhodobacter_64_50, SCNpilot_P_inoc_Rhodobacter_64_50, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11352..12902)
DNA (1551bp) protein (517aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D6ZZ96_STAND
filamentation induced by cAMP protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ADH89232.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCN18_26_2_15_R5_B_scaffold_1023_14

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comp(13029..13460)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J9DCN4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN03261.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying 14 items

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