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SCN18_26_2_15_R5_B_scaffold_1136

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_1136_1
SCNPILOT_CONT_500_BF_Rhizobiales_63_22, SCNPILOT_CONT_500_BF_Rhizobiales_63_22, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1460)
DNA (1458bp) protein (486aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI00036A294B
ABC transporter related
ABC transporter related {ECO:0000313|EMBL:ABS70121.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCN18_26_2_15_R5_B_scaffold_1136_2
SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, SCNPILOT_SOLID2_TRIM150_Rhizobiales_63_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1457..2527)
DNA (1071bp) protein (357aa)
Secretion protein HlyD n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XE9_RHOPB
secretion protein HlyD
Secretion protein HlyD {ECO:0000313|EMBL:ABD90187.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCN18_26_2_15_R5_B_scaffold_1136_3
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2628..3518)
DNA (891bp) protein (297aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A1C7_9PROT
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EHM00380.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
alpha/beta hydrolase fold protein
SCN18_26_2_15_R5_B_scaffold_1136_4
Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3515..4585)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00035E98D5
Beta-lactamase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SCN18_26_2_15_R5_B_scaffold_1136_5
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4620..5663
DNA (1044bp) protein (348aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00219};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00219, ECO:0000256|RuleBase:RU003440};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
dihydroorotase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B419EA
dihydroorotase
SCN18_26_2_15_R5_B_scaffold_1136_6
Brevundimonas diminuta_SCNPILOT_CONT_300_BF_Brevundimonas_67_6, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5693..6490
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YHH2_9GAMM
NUDIX hydrolase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1136_7
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6495..7847
DNA (1353bp) protein (451aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J9P1_9PROT
regB; two-component sensor histidine kinase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1136_8
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7871..8461
DNA (591bp) protein (197aa)
Response regulator receiver domain protein (CheY-like) n=1 Tax=alpha proteobacterium BAL199 RepID=A8TNH8_9PROT
two-component response regulator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1136_9
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8500..9330
DNA (831bp) protein (277aa)
ABC-type transporter, permease component: HAAT family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN34_9PROT
inner-membrane translocator
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1136_10
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9336..10868
DNA (1533bp) protein (511aa)
Putative ABC transporter, permease (N-ter) and ATP-binding (C-ter) components n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKJ0_AZOBR
ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1136_11
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10865..11527
DNA (663bp) protein (221aa)
Branched-chain amino acid ABC transporter ATP-binding component (LivF-like) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AKJ1_AZOBR
branched-chain amino acid ABC transporter; ATP-binding component (livF-like)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1136_12
SCNPILOT_CONT_500_BF_Rhizobiales_64_17, SCNPILOT_CONT_500_BF_Rhizobiales_64_17, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11573..12166)
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium AH6 RepID=Q9RPT2_9BACT
enoyl-CoA hydratase/isomerase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Displaying 12 items

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