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SCN18_26_2_15_R5_B_scaffold_1149

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_26_2_15_R5_B_scaffold_1149_1
SCNPILOT_EXPT_300_BF_Sphingomonas_67_13, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35..505)
DNA (471bp) protein (157aa)
UPI0003D03058 related cluster n=1 Tax=unknown RepID=UPI0003D03058
Uncharacterized protein {ECO:0000313|EMBL:KGF80640.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
SCN18_26_2_15_R5_B_scaffold_1149_2
SCNPILOT_CONT_1000_BF_Rhizobiales_65_18, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

600..1574
DNA (975bp) protein (325aa)
Predicted transcriptional regulator n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJD5_9PROT
Predicted transcriptional regulator {ECO:0000313|EMBL:EDP66739.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
helix-turn-helix type 11 domain-containing protein
SCN18_26_2_15_R5_B_scaffold_1149_3
SCNPILOT_CONT_300_BF_Rhizobiales_62_47, SCNPILOT_CONT_300_BF_Rhizobiales_62_47, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1578..2291)
DNA (714bp) protein (238aa)
Glutathione transferase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S641_9SPHN
glutathione transferase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1149_4
CN-SCN_Phenylobacterium_14x, CN-SCN_Phenylobacterium_14x, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2461..2982
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1ICV1_9BRAD
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1149_5
SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3022..4011
DNA (990bp) protein (330aa)
Luciferase family protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VE62_SPHWW
luciferase family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1149_6
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4238..5497
DNA (1260bp) protein (420aa)
Extracellular ligand-binding receptor id=3987077 bin=GWC2_Methylomirabilis_70_24 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched-chain amino acid ABC transporter substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1149_7
SCNPILOT_CONT_1000_BF_Mesorhizobium_65_39, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5882..6811
DNA (930bp) protein (310aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZN73_RHILW
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACI54863.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCN18_26_2_15_R5_B_scaffold_1149_8
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6940..7671)
DNA (732bp) protein (244aa)
Branched-chain amino acid transport ATP-binding protein LivF n=1 Tax=Rhodovulum sp. PH10 RepID=J6J7H2_9RHOB
livF; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1149_9
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7661..8395)
DNA (735bp) protein (245aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RGA0_9PROT
livG; branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1149_10
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8392..9378)
DNA (987bp) protein (329aa)
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Rhodovulum sp. PH10 RepID=J5PNB9_9RHOB
livH; branched chain amino acid ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1149_11
SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, SCNPILOT_CONT_750_BF_Rhodospirillales_68_10, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9359..10234)
DNA (876bp) protein (292aa)
Putative branched-chain amino acid ABC transporter permease component n=1 Tax=Rhodovulum sp. PH10 RepID=J6LG18_9RHOB
livM; branched-chain amino acid ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCN18_26_2_15_R5_B_scaffold_1149_12
SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, SCNPILOT_CONT_750_BF_Rhodospirillales_70_18, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10384..11871)
DNA (1488bp) protein (496aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000370549B
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:EJZ30613.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
type I phosphodiesterase/nucleotide pyrophosphatase
SCN18_26_2_15_R5_B_scaffold_1149_13
unknown

Not on your lists

comp(11880..12050)
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying 13 items

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